PrAGMATiC: a Probabilistic and Generative Model of Areas Tiling the Cortex (1504.03622v1)

Abstract: Much of the human cortex seems to be organized into topographic cortical maps. Yet few quantitative methods exist for characterizing these maps. To address this issue we developed a modeling framework that can reveal group-level cortical maps based on neuroimaging data. PrAGMATiC, a probabilistic and generative model of areas tiling the cortex, is a hierarchical Bayesian generative model of cortical maps. This model assumes that the cortical map in each individual subject is a sample from a single underlying probability distribution. Learning the parameters of this distribution reveals the properties of a cortical map that are common across a group of subjects while avoiding the potentially lossy step of co-registering each subject into a group anatomical space. In this report we give a mathematical description of PrAGMATiC, describe approximations that make it practical to use, show preliminary results from its application to a real dataset, and describe a number of possible future extensions.