Normative Modelling in Neuroimaging: A Practical Guide for Researchers (2509.07237v1)

Abstract: Normative modelling is an increasingly common statistical technique in neuroimaging that estimates population-level benchmarks in brain structure. It enables the quantification of individual deviations from expected distributions whilst accounting for biological and technical covariates without requiring large, matched control groups. This makes it a powerful alternative to traditional case-control studies for identifying brain structural alterations associated with pathology. Despite the availability of numerous modelling approaches and several toolboxes with pretrained models, the distinct strengths and limitations of normative modelling make it difficult to determine how and when to implement them appropriately. This review offers practical guidance and outlines statistical considerations for clinical researchers using normative modelling in neuroimaging. We compare several open-source normative modelling tools through a worked example using clinical epilepsy data; outlining decision points, common pitfalls, and considerations for responsible implementation, to support broader and more rigorous adoption of normative modelling in neuroimaging research.