Trustworthy Agentic AI Requires Deterministic Architectural Boundaries

Abstract: Current agentic AI architectures are fundamentally incompatible with the security and epistemological requirements of high-stakes scientific workflows. The problem is not inadequate alignment or insufficient guardrails, it is architectural: autoregressive LLMs process all tokens uniformly, making deterministic command--data separation unattainable through training alone. We argue that deterministic, architectural enforcement, not probabilistic learned behavior, is a necessary condition for trustworthy AI-assisted science. We introduce the Trinity Defense Architecture, which enforces security through three mechanisms: action governance via a finite action calculus with reference-monitor enforcement, information-flow control via mandatory access labels preventing cross-scope leakage, and privilege separation isolating perception from execution. We show that without unforgeable provenance and deterministic mediation, the ``Lethal Trifecta'' (untrusted inputs, privileged data access, external action capability) turns authorization security into an exploit-discovery problem: training-based defenses may reduce empirical attack rates but cannot provide deterministic guarantees. The ML community must recognize that alignment is insufficient for authorization security, and that architectural mediation is required before agentic AI can be safely deployed in consequential scientific domains.