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Extend sensitivity–activity analysis to p-symmetric Boolean functions and investigate biological origins of symmetry

Extend the sensitivity versus activity-bias analysis developed for 1- and 2-symmetric Boolean functions to p-symmetric Boolean functions with p > 2, and investigate biological mechanisms that give rise to generalized symmetry in gene regulatory functions.

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Background

The paper computes exact sensitivity–activity relations for 1- and 2-symmetric Boolean functions and argues that 2-symmetric functions better capture certain features of empirical gene-regulatory data than generic canalizing functions. The authors propose extending this analytical framework to the broader class of p-symmetric functions (p > 2) and to probe why generalized symmetry is prevalent in biological regulation.

References

Extending the above analysis to {\em p-symmetric} functions with $p>2$ and exploring biological mechanisms for symmetry in gene regulatory functions are left for future work.

On Networks and their Applications: Stability of Gene Regulatory Networks and Gene Function Prediction using Autoencoders (2408.07064 - Coban, 13 Aug 2024) in Part I: Dynamics Stability Analysis of Gene Regulatory Networks, Conclusion