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Hamiltonian Active Matter in Incompressible Fluid Membranes

Published 3 Dec 2025 in cond-mat.soft, physics.bio-ph, and physics.flu-dyn | (2512.03609v1)

Abstract: Active proteins and membrane-bound motors exert force dipole flows along fluid interfaces and lipid bilayers. We develop a unified hydrodynamic and Hamiltonian framework for the interactions of pusher and puller dipoles embedded in an incompressible two-dimensional membrane supported by a shallow viscous subphase. Beginning from the screened Stokes equations of the membrane--subphase composite, we derive the real-space incompressible Green's tensor, obtain its near- and far-field asymptotics, and construct the resulting dipolar velocity and stream functions. Although generic dipoles reorient under the local membrane vorticity, we show that the far-field dipolar flow is vorticity-free; force-free motors therefore retain fixed orientation and obey a Hamiltonian dynamics in which the positions of NN dipoles evolve via an effective Hamiltonian built from the dipolar stream function. In the near field, where the flow possesses finite vorticity, a Hamiltonian formulation is recovered in the quenched-orientation limit. Exploiting this structure, we simulate ensembles of pusher and puller dipoles and compare the dynamics generated by the $1/r$ near-field kernel and the subphase screened 1/r<sup>31/r<sup>{3} far-field kernel. For identical dipoles, the far-field Hamiltonian produces rapid clustering from random initial conditions, whereas the near-field Hamiltonian suppresses collapse and yields extended, non-aggregating configurations.

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