A Climate-Aware Deep Learning Framework for Generalizable Epidemic Forecasting

Abstract: Precise outbreak forecasting of infectious diseases is essential for effective public health responses and epidemic control. The increased availability of ML methods for time-series forecasting presents an enticing avenue to enhance outbreak forecasting. Though the COVID-19 outbreak demonstrated the value of applying ML models to predict epidemic profiles, using ML models to forecast endemic diseases remains underexplored. In this work, we present ForecastNet-XCL (an ensemble model based on XGBoost+CNN+BiLSTM), a deep learning hybrid framework designed to addresses this gap by creating accurate multi-week RSV forecasts up to 100 weeks in advance based on climate and temporal data, without access to real-time surveillance on RSV. The framework combines high-resolution feature learning with long-range temporal dependency capturing mechanisms, bolstered by an autoregressive module trained on climate-controlled lagged relations. Stochastic inference returns probabilistic intervals to inform decision-making. Evaluated across 34 U.S. states, ForecastNet-XCL reliably outperformed statistical baselines, individual neural nets, and conventional ensemble methods in both within- and cross-state scenarios, sustaining accuracy over extended forecast horizons. Training on climatologically diverse datasets enhanced generalization furthermore, particularly in locations having irregular or biennial RSV patterns. ForecastNet-XCL's efficiency, performance, and uncertainty-aware design make it a deployable early-warning tool amid escalating climate pressures and constrained surveillance resources.