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Multivariate Output Analysis for Markov chain Monte Carlo (1512.07713v4)

Published 24 Dec 2015 in math.ST, stat.CO, and stat.TH

Abstract: Markov chain Monte Carlo (MCMC) produces a correlated sample for estimating expectations with respect to a target distribution. A fundamental question is when should sampling stop so that we have good estimates of the desired quantities? The key to answering this question lies in assessing the Monte Carlo error through a multivariate Markov chain central limit theorem (CLT). The multivariate nature of this Monte Carlo error largely has been ignored in the MCMC literature. We present a multivariate framework for terminating simulation in MCMC. We define a multivariate effective sample size, estimating which requires strongly consistent estimators of the covariance matrix in the Markov chain CLT; a property we show for the multivariate batch means estimator. We then provide a lower bound on the number of minimum effective samples required for a desired level of precision. This lower bound depends on the problem only in the dimension of the expectation being estimated, and not on the underlying stochastic process. This result is obtained by drawing a connection between terminating simulation via effective sample size and terminating simulation using a relative standard deviation fixed-volume sequential stopping rule; which we demonstrate is an asymptotically valid procedure. The finite sample properties of the proposed method are demonstrated in a variety of examples.

Citations (256)

Summary

  • The paper introduces a multivariate analysis framework for MCMC by incorporating cross-correlations and defining an effective sample size to replace univariate methods.
  • It leverages the multivariate central limit theorem and establishes the strong consistency of the multivariate batch means estimator under relaxed conditions.
  • The proposed relative standard deviation fixed-volume stopping rule enables earlier simulation termination while maintaining high-quality estimates across various applications.

Multivariate Output Analysis for Markov Chain Monte Carlo

The paper "Multivariate Output Analysis for Markov Chain Monte Carlo" authored by Dootika Vats, James M. Flegal, and Galin L. Jones addresses a fundamental question in the use of Markov Chain Monte Carlo (MCMC) methods for estimating expectations with respect to a target distribution: determining the appropriate stopping point for MCMC simulations to ensure reliable estimates. The key lies in assessing the Monte Carlo error, and the authors challenge the prevailing univariate perspectives by introducing a multivariate framework.

The traditional methods often focus on univariate analyses, which consider each component of a vector of quantities separately, leading to incomplete understandings of joint distributions. This paper overcomes these limitations by presenting a methodological framework for multivariate analysis of MCMC output, which accounts for the cross-correlations among components—a factor typically ignored yet critically influential in practice.

The novel contributions of the paper include the definition of a multivariate effective sample size (ESS) and a lower bound on the number of effective samples required to achieve a desired level of precision. The methodology relies on the multivariate central limit theorem (CLT) and entails strongly consistent estimators of the covariance matrix in the Markov chain CLT. Specifically, the authors demonstrate the strong consistency of the multivariate batch means (mBM) estimator under less restrictive conditions than previously required, easing the practical implementation.

Compared to traditional sequential stopping rules that often use fixed-width criteria to terminate simulation, the paper proposes a relative standard deviation fixed-volume sequential stopping rule. This rule, unlike its predecessors, does not stop simulation based on the absolute size of the confidence region but rather its size relative to the inherent variability of the target distribution. Such criteria are argued to be more representative of the problem's characteristics and lead to earlier termination while producing higher quality estimates.

The authors provide extensive examples to validate their methods, including Bayesian logistic regression, vector autoregressive processes, Bayesian lasso regression, and Bayesian dynamic spatial-temporal models. These examples highlight the efficiency of multivariate methods which terminate significantly earlier compared to univariate counterparts, an advantage further underscored when the computational burden is part of the consideration.

The implications of this research are significant: it not only refines the theoretical groundwork for multivariate MCMC output analysis but also offers practical standards for its implementation. As computational power and data complexity increase, these multivariate techniques promise broader applicability across complex hierarchical models and high-dimensional parameter spaces.

Future developments in artificial intelligence could further benefit from these findings, particularly in areas demanding robust uncertainty quantification in multivariate settings. The multivariate methodologies described could potentially be expanded or adapted to specific applications in AI, where modeling joint distributions accurately and efficiently is imperative. Moreover, this paper sets the stage for more nuanced discussions around MCMC diagnostics in multivariate settings, potentially sparking new lines of inquiry into dimension reduction techniques and high-dimensional asymptotics for covariance estimation in MCMC.

Overall, this paper contributes robust methods and methodologies that enhance the reliability and efficiency of multivariate MCMC output analysis, providing clear pathways for future research and practical application in the domain of computational statistics and beyond.

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