Characterizing Impacts of Storage Faults on HPC Applications: A Methodology and Insights

Abstract: In recent years, the increasing complexity in scientific simulations and emerging demands for training heavy artificial intelligence models require massive and fast data accesses, which urges high-performance computing (HPC) platforms to equip with more advanced storage infrastructures such as solid-state disks (SSDs). While SSDs offer high-performance I/O, the reliability challenges faced by the HPC applications under the SSD-related failures remains unclear, in particular for failures resulting in data corruptions. The goal of this paper is to understand the impact of SSD-related faults on the behaviors of complex HPC applications. To this end, we propose FFIS, a FUSE-based fault injection framework that systematically introduces storage faults into the application layer to model the errors originated from SSDs. FFIS is able to plant different I/O related faults into the data returned from underlying file systems, which enables the investigation on the error resilience characteristics of the scientific file format. We demonstrate the use of FFIS with three representative real HPC applications, showing how each application reacts to the data corruptions, and provide insights on the error resilience of the widely adopted HDF5 file format for the HPC applications.