Papers
Topics
Authors
Recent
Detailed Answer
Quick Answer
Concise responses based on abstracts only
Detailed Answer
Well-researched responses based on abstracts and relevant paper content.
Custom Instructions Pro
Preferences or requirements that you'd like Emergent Mind to consider when generating responses
Gemini 2.5 Flash
Gemini 2.5 Flash 62 tok/s
Gemini 2.5 Pro 48 tok/s Pro
GPT-5 Medium 14 tok/s Pro
GPT-5 High 13 tok/s Pro
GPT-4o 93 tok/s Pro
Kimi K2 213 tok/s Pro
GPT OSS 120B 458 tok/s Pro
Claude Sonnet 4 38 tok/s Pro
2000 character limit reached

Reactive Dynamics and Spectroscopy of Hydrogen Transfer from Neural Network-Based Reactive Potential Energy Surfaces (1911.09475v1)

Published 21 Nov 2019 in physics.chem-ph

Abstract: The in silico exploration of chemical, physical and biological systems requires accurate and efficient energy functions to follow their nuclear dynamics at a molecular and atomistic level. Recently, machine learning tools gained a lot of attention in the field of molecular sciences and simulations and are increasingly used to investigate the dynamics of such systems. Among the various approaches, artificial neural networks (NNs) are one promising tool to learn a representation of potential energy surfaces. This is done by formulating the problem as a mapping from a set of atomic positions $\mathbf{x}$ and nuclear charges $Z_i$ to a potential energy $V(\mathbf{x})$. Here, a fully-dimensional, reactive neural network representation for malonaldehyde (MA), acetoacetaldehyde (AAA) and acetylacetone (AcAc) is learned. It is used to run finite-temperature molecular dynamics simulations, and to determine the infrared spectra and the hydrogen transfer rates for the three molecules. The finite-temperature infrared spectrum for MA based on the NN learned on MP2 reference data provides a realistic representation of the low-frequency modes and the H-transfer band whereas the CH vibrations are somewhat too high in frequency. For AAA it is demonstrated that the IR spectroscopy is sensitive to the position of the transferring hydrogen at either the OCH- or OCCH$_3$ end of the molecule. For the hydrogen transfer rates it is demonstrated that the O-O vibration is a gating mode and largely determines the rate at which the hydrogen is transferred between the donor and acceptor. Finally, possibilities to further improve such NN-based potential energy surfaces are explored. They include the transferability of an NN-learned energy function across chemical species (here methylation) and transfer learning from a lower level of reference data (MP2) to a higher level of theory (pair natural orbital-LCCSD(T)).

Summary

We haven't generated a summary for this paper yet.

List To Do Tasks Checklist Streamline Icon: https://streamlinehq.com

Collections

Sign up for free to add this paper to one or more collections.

Lightbulb On Streamline Icon: https://streamlinehq.com

Continue Learning

We haven't generated follow-up questions for this paper yet.