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Parallel Prefix Sum Algorithm Overview

Updated 27 November 2025
  • The parallel prefix sum algorithm is a fundamental parallel computing primitive that computes cumulative sums using an associative operator with O(N) work and O(log N) span.
  • Modern implementations leverage specialized hardware like GPUs, AI accelerators, and Tensor Core Units to optimize performance through matrix operations and pipelined computation.
  • Applications span radix sort, sampling, and distributed computing, emphasizing minimal memory traffic, synchronization overhead, and efficient communication.

A parallel prefix sum algorithm, also termed parallel scan, computes prefix sums of an array under a binary associative operator in parallel, enabling efficient cumulative computations foundational to parallel algorithms, AI workloads, and numerical computing. For an array x[0N1]x[0 \ldots N-1] and associative “++”, the inclusive scan produces S[i]=j=0ix[j]S[i] = \sum_{j=0}^i x[j], and the exclusive scan Sex[i]=j=0i1x[j]S_{ex}[i] = \sum_{j=0}^{i-1} x[j], Sex[0]=0S_{ex}[0]=0. The central computational challenge is to minimize work (O(N)O(N) is optimal) and minimize span/depth (O(logN)O(\log N) in shared-memory and distributed models), while exploiting hardware characteristics for peak performance. Modern implementations range from work-efficient tree-based algorithms to accelerator-optimized routines leveraging specialized matrix-multiplication units and pipelined communication.

1. Work-Efficient, Theoretically Optimal Prefix Sum Algorithms

The archetype for a work-optimal O(logN)O(\log N) depth scan is the tree-based approach. Blelloch’s algorithm (1990) consists of an “up-sweep” (reduce) phase constructing a binary tree of partial sums (at each level, adjacent pairs are combined), followed by a “down-sweep” to propagate exclusive/inclusive sum prefixes to leaves. Tree-structured algorithms maintain O(N)O(N) total work, O(logN)O(\log N) span, and avoid atomic operations in shared-memory environments by careful scheduling. Formal lower bounds assert any parallel prefix-sum over an NN-element array and an arbitrary associative operator requires Ω(logN)\Omega(\log N) depth and Ω(N)\Omega(N) work in the algebraic decision-tree model (Tithi et al., 2022).

Key invariants include correct accumulation of partial sums at tree nodes after the up-sweep and the correctness of down-sweep propagation by induction on the tree depth. No atomics are needed: each location is written by at most one thread per phase. Memory usage is O(N)O(N) in place, and only a global barrier is required after each level.

2. Scan Algorithms on Modern Accelerators

Emerging parallel hardware such as GPUs, AI accelerators, and specialized processors incorporate architectural features—register files, vector units, and matrix-multiplication engines—that shift the practical optimization landscape. On Ascend AI processors, parallel prefix sum is re-expressed as a sequence of small-matrix multiplications, exploiting “cube” units for matrix-matrix operations and “vector” units for carry propagation (Wróblewski et al., 21 May 2025). By tiling the input into s×ss \times s row-major matrices, a tile is scanned by multiplying with an upper-triangular all-ones matrix UsU_s; global carry-in dependencies are handled via vector units. ScanU and ScanUL1 algorithms on Ascend saturate data pipelines and leverage accumulation registers, yielding up to 9.6×9.6\times speedup over vector-only implementations for large NN.

On Tensor Core Unit (TCU) models, as analyzed in "A Parallel Scan Algorithm in the Tensor Core Unit Model" (Zouzias et al., 2024), the scan is composed of O(n/s2)O(n / s^2) multiplications of s×ss \times s matrices, reaching depth 2logsn2 \lfloor \log_s n \rfloor. This generalizes the classic Brent–Kung scheme (s=2s=2) to any fixed hardware tile, balancing latency (\ell), tile size (ss), and parallelism level (pp). The time complexity is O(n(1+/s2)/p+(s2+)logsn)O(n(1+\ell/s^2)/p + (s^2 + \ell) \log_s n), with memory and compute operations pipelined to maximize throughput and minimize synchronization.

On CUDA-capable GPUs, hybrid scan primitives such as LightScan (Liu et al., 2016) maximize SM occupancy, minimize inter-block synchronization, and exploit register shuffles and L2-coherent loads/stores. Intra-block Hillis–Steele or tree-structured scans are used for local prefixing, followed by lightweight inter-block communication using cache-bypassed atomics rather than global barriers. This maximizes arithmetic intensity and achieves speedups up to 2×2\times over leading GPU libraries.

3. Algorithmic Variants: Hillis–Steele, Blelloch, and Ladner–Fischer

Several classic PRAM scan schemes remain foundational:

Algorithm Work Span Main Attributes
Hillis–Steele O(NlogN)O(N \log N) O(logN)O(\log N) Simple, non-optimal work
Blelloch (tree) O(N)O(N) O(logN)O(\log N) Two-phase, up/down sweep
Ladner–Fischer O(N)O(N) O(logN)O(\log N) Fewer steps than Blelloch, in-place

Hillis–Steele (“naive”) builds the scan in log2N\log_2 N steps by updating each position jj using j2dj-2^d in each round, requiring O(NlogN)O(N \log N) work and double-buffering. It is work-suboptimal and bandwidth-intensive but simple for small NN. Blelloch’s up-sweep/down-sweep tree achieves optimal O(N)O(N) work and O(logN)O(\log N) span, but requires one extra array copy for in-place transformation. Ladner–Fischer optimizes the down-sweep to avoid the final inclusive conversion pass and reduces global memory usage, outperforming others for large NN (Särkkä et al., 13 Nov 2025).

Hybrid approaches, such as Sengupta’s, switch to local (block-sized) Hillis–Steele within blocks when subarrays are small; tuning the block-size threshold achieves best practical throughput on GPU platforms (Särkkä et al., 13 Nov 2025).

4. Distributed-Memory and Communication-Efficient Algorithms

In distributed and message-passing environments, minimizing communication rounds is critical. The scan problem on pp processors requires at least log2p\lceil \log_2 p \rceil communication rounds in the one-ported, bounded-communication model.

Standard approaches include:

  • Hillis–Steele/Kogge–Stone inclusive scan: log2p\lceil\log_2 p\rceil rounds, optimal for inclusive sum.
  • Shift-then-inclusive exclusive scan: incurs one extra round (total 1+log2(p1)1 + \lceil\log_2(p-1)\rceil).
  • Modified inclusive scan: achieves log2p\lceil\log_2 p\rceil rounds but nearly doubles the number of operator applications.

A novel “123-doubling” exclusive scan, as introduced in (Träff, 7 Jul 2025), bootstraps the doubling pattern to achieve q=log2(p1)+log2(43)q = \lceil\log_2(p-1) + \log_2(\frac{4}{3})\rceil rounds and q1q-1 \oplus-applications, precisely covering s0=1s_0=1, s1=2s_1=2, sk=32k2s_k=3\cdot 2^{k-2} skips and minimizing both startup rounds and operator invocations. Practical MPI cluster benchmarks show reductions up to 25%25\% in latency-dominated small vector settings.

5. Specialized Scan Applications and Algorithmic Generalizations

The theoretical scan primitive generalizes to parallel evaluation of first-order recurrences, such as xt=atxt1+btx_t = a_t x_{t-1} + b_t. This can be recast as a pair-valued prefix operation:

(a,b)(c,d)=(ac,b+ad)(a, b) \oplus (c, d) = (ac, b + a d)

with an identity of (1,0)(1,0), and efficiently re-expressed via two scalar prefix sums through association with affine matrix products or log-space transforms. This enables O(logn)O(\log n)–time parallelization of a broad class of linear dynamical systems and is empirically verified to deliver an O(n/logn)O(n/\log n) speedup in real hardware (Heinsen, 2023).

In large-scale AI and analytics, prefix sum is a key kernel for radix sort, mask compaction, batching, and top-kk/pp sampling. On Ascend AI cores, optimizing scan for matmul engines yields $1.3$–3.3×3.3\times faster radix sort (over PyTorch baseline for N5×105N\geq5\times10^5), $2$–3×3\times improvement in sampling, and approaches 37.5%37.5\% of theoretical memory bandwidth in multi-core scan (Wróblewski et al., 21 May 2025).

6. Implementation Trade-Offs and Best Practices

Practical high-performance scan implementations involve precise hardware matching and bandwidth optimization (Wróblewski et al., 21 May 2025, Liu et al., 2016):

  • Tile input to match the native s×ss\times s matrix multiply unit (Tensor Cores, AMX).
  • Load static matrices (all-ones upper/lower triangular) into SRAM or corresponding operand registers once per kernel.
  • Pipeline memory transfers, matrix ops, carry propagation, and (where available) exploit overlapping pipelines for compute and copy.
  • Adopt explicit two-phase block scan: per-tile local scan + per-block reduction, followed by block-sum scan and in-place carry addition in a final pass.
  • Minimize global memory traffic: each data element is ideally read/written O(1)O(1) times.
  • Limit global synchronization points to a single barrier per full-array scan.
  • For batched/multi-array operations, balance vector/matmul core utilization, especially when hardware exhibits vector-to-matrix resource skew.

7. Practical Performance and Recommendations

Empirical data demonstrates multidimensional performance advantages:

  • On Ascend 910B4: single-core ScanU up to 5×5\times faster and ScanUL1 up to 9.6×9.6\times faster than vector-only scans; multi-core MCScan achieves 37.5%37.5\% of $800$ GB/s theoretical bandwidth (Wróblewski et al., 21 May 2025).
  • On Tesla K40c: LightScan achieves up to $25.5$ GEPS for single-precision and $13.0$ GEPS for double, with 2.0×2.0\times2.1×2.1\times speedup over CUDPP/Thrust/ModernGPU, and 8.6×8.6\times over Intel TBB on 16-core CPUs (Liu et al., 2016).
  • On modern GPUs, in-place Ladner–Fischer algorithms offer lowest memory footprint and fewest global steps for large arrays; Sengupta hybrid is fastest at intermediate TT; and Hillis–Steele remains suitable only for tiny inputs (Särkkä et al., 13 Nov 2025).
  • In communication-limited MPI environments, integrating the 123-doubling exclusive scan reduces communication rounds and achieves tangible performance improvements on small to moderate message sizes (Träff, 7 Jul 2025).

In sum, the field of parallel prefix sum algorithms demonstrates close synergy between algorithmic structure, hardware exploitation, and empirical performance. Current best practice emphasizes matching the scan’s reduction and carry-propagation to the architectural primitives of the target platform and minimizing communication, synchronization, and bandwidth overhead throughout the parallelization strategy.

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