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Agentic Software Engineering (SE 3.0)

Updated 14 September 2025
  • Agentic Software Engineering (SE 3.0) is a paradigm integrating human direction with autonomous agents to orchestrate every stage of the software lifecycle.
  • It formalizes engineering workflows with artifacts like BriefingScripts and MentorScripts, ensuring version-controlled, reproducible, and auditable processes.
  • Structured workbenches (ACE for human orchestration and AEE for agent execution) enable efficient, parallel processing and scalable multi-agent collaboration.

Agentic Software Engineering (SE 3.0) marks an epochal shift in the discipline, introducing intelligent agents that autonomously drive, collaborate, and optimize the entire software engineering lifecycle. In SE 3.0, agents are not limited to code generation; instead, they orchestrate complex, goal-driven engineering tasks, adaptively interact with human experts, and manage structured workflows under formal and reproducible protocols. The field is characterized by a duality of modalities—“SE for Humans” and “SE for Agents”—that radically reconceptualizes actors, processes, tools, and artifacts, fostering the evolution from ad hoc agentic coding toward disciplined, scalable, and trustworthy engineering systems.

1. Foundational Modalities and Pillars

Agentic SE 3.0 introduces a dual structure:

  • SE for Humans (SE4H): Human engineers become “Agent Coaches,” focusing on specifying intents, mentoring agents, curating context, and making high-level judgments (e.g., merge readiness).
  • SE for Agents (SE4A): Autonomous coding agents operate within rigorously structured, repeatable processes, executing tasks at scale and invoking human expertise for ambiguous or high-stakes decisions (Hassan et al., 7 Sep 2025).

The foundational pillars are explicitly redefined:

  • Actors: Teams blend human strategists with agentic peers, where humans orchestrate and agents autonomously execute.
  • Processes: Structured, version-controlled workflows replace informal prompting; artifacts (e.g., BriefingScripts, MentorScripts, Merge-Readiness Packs) formalize both mission context and validation.
  • Tools: Dual workbenches are proposed: the Agent Command Environment (ACE) for human orchestration and the Agent Execution Environment (AEE) for agent runtime operations.
  • Artifacts: Durable, auditable, and versioned artifacts supplant informal tickets or ephemeral prompts, supporting traceability and regulatory compliance.

Mathematically, the engineering solution in SE 3.0 can be depicted as: SE3.0=f(Actors,Processes,Tools,Artifacts)SE_{3.0} = f(\text{Actors}, \text{Processes}, \text{Tools}, \text{Artifacts}) where each dimension encompasses both human and agent modalities (Hassan et al., 7 Sep 2025).

2. Structured Engineering Workbenches: ACE and AEE

Two purpose-built workbenches operationalize this duality:

  • Agent Command Environment (ACE): Serves as the human control center. It enables authoring structured guidelines (e.g., BriefingScripts), orchestrates parallel agent workflows, manages evidence bundles (e.g., Merge-Readiness Packs), and handles agent Consultation Request Packs (CRPs) for ambiguous decisions.
  • Agent Execution Environment (AEE): Hosts agent-side execution. It features lightweight interfaces optimized for bulk, parallel processing, semantic search, structural editors, hyper-debuggers, and robust self-monitoring. The AEE is engineered for machine efficiency and parallelism, not human readability.

A bidirectional dialogue emerges: humans articulate intent and review agent outputs, while agents perform execution, escalate complex trade-offs, and request human mentorship.

3. From Agentic Coding to Agentic Software Engineering: Structured Processes

While prior work often highlighted isolated, conversational code generation, SE 3.0 establishes structured, scalable engineering protocols:

  • BriefingScripts: Specify goals, operational context, and explicit success criteria.
  • LoopScripts: Govern agent workflow decomposition, task parallelization, and checkpointing.
  • MentorScripts: Codify human expertise and norms for durable agent mentorship (“mentorship-as-code”).
  • Versioned Evidence Packs: MRPs and CRPs support formal review, traceability, and auditability.

This formalization enables N-to-N collaboration, where agent fleets can be mentored and orchestrated by multiple human experts or by other agents, grounded in reproducible artifacts and workflows.

4. Collaboration, Trust, and Human-AI Partnership

A defining feature is bi-directional, symbiotic collaboration:

  • Agents proactively initiate human callbacks on encountering ambiguity, trade-off scenarios, or insufficient reasoning.
  • Humans intervene primarily on high-level guidance, merge decisions, and audit trails, reducing cognitive overload but increasing strategic responsibility.
  • Evidence-based collaboration using durable artifacts enables rapid agent iteration under human oversight while supporting rigorous accountability.

The field is converging on composite approaches fusing classical SE methods (e.g., version control, formal verification, modularity) with agentic autonomy, emphasizing both safety and creativity (Gros et al., 2023, Hassan et al., 8 Oct 2024). Trust and utility gaps are being actively researched: empirical studies reveal that, although agents accelerate throughput, human reviewers are sensitive to code quality, style alignment, and maintainability (Li et al., 20 Jul 2025).

5. Governance, Safety, and Verification

Agentic SE must address both technical and normative risks:

  • Uncertainty Calibration: Extraction and propagation of confidence indicators (e.g., deep ensembles, temperature scaling) from generative models are vital for risk management (Gros et al., 2023).
  • Verification and Validation (V&V): Agentic workflows increasingly integrate V&V steps (unit, integration, and formal tests) directly into agent processes; AI-driven code must be formally checked and auditable (Roychoudhury, 24 Aug 2025).
  • Provenance and Accountability: Metadata tracking—from generation prompt to decision log—augments traditional version control for regulatory and security compliance.
  • Ethical Alignment and Policy: Research directions target value alignment, ethical audits, and governance protocols for agent-generated artifacts deployed in critical domains.

Structured evaluation, including uncertainty propagation, multi-objective optimization (balancing correctness, latency, cost), and taxonomy-based assessment frameworks (e.g., Bloom’s Taxonomy) are being advanced (Saad et al., 19 Mar 2025, Hassan et al., 8 Oct 2024).

6. Education, Maturity Models, and Roadmap

The shift toward SE 3.0 fundamentally alters engineering education and organizational readiness:

  • Curricula must pivot from code-centric to orchestration-centric pedagogy. Future engineers master the drafting of precise specifications, mentorship scripts, structured collaboration, and traceability protocols rather than routine coding (Hassan et al., 7 Sep 2025).
  • New frameworks such as the Agentic AI Software Engineering Maturity Model (AAISEMM)—grounded in layered architectural views (Data, Business Logic, Presentation)—enable incremental, organization-wide agentic transformation, paralleling established models like CMMI (Zohaib et al., 5 Aug 2025).
  • Roadmaps articulate open research challenges, including expressive DSLs for agentic processes, persistent agent memory, scalable multi-agent orchestration, and improved observability and attribution in human-agent workflows.

Community-wide dialogue is emphasized to standardize best practices, vocabulary, and protocols, catalyzing transparent evolution and reproducibility in agentic SE (Hassan et al., 7 Sep 2025).

7. Empirical Evidence, Limitations, and Future Directions

Recent large-scale datasets such as AIDev (456,000+ agentic pull requests across 61,000 repositories) empirically ground SE 3.0 research, enabling benchmarking, workflow optimization, and trust calibration (Li et al., 20 Jul 2025). While agentic systems offer dramatic speedups and automation, current limitations persist:

  • Lower real-world acceptance rates highlight the trust and utility gap.
  • Noise and distractor effects in episodic memory can degrade agent performance; dynamic context retrieval and memory curation are active research avenues (Lindenbauer et al., 29 May 2025).
  • Scalability and multi-agent coordination, especially in distributed settings and regulatory environments (e.g., 6G architectures), require robust frameworks for governance, integration, and cost-performance management (Zohaib et al., 5 Aug 2025).
  • Structured agentic platforms are moving toward open, extensible architectures, with experimentation and community feedback driving further advances (Sami et al., 8 Jun 2024).

Summary Table: Key Components of Structured Agentic SE (SE 3.0)

Dimension Human-Oriented Modality (ACE) Agent-Oriented Modality (AEE)
Actors Agent Coaches, Mentors Autonomous coding agents
Processes Briefing, Mentoring, Review LoopScripts, Workflow Automation
Tools Command environment, UI Hyper-debuggers, Semantic editors
Artifacts Briefing/Mentor Scripts, MRPs Evidence packs, CRPs, Parallel logs

All features and modalities above are formally specified in the SE 3.0 literature (Hassan et al., 7 Sep 2025), and further supported by real-world empirical studies (Li et al., 20 Jul 2025, Sami et al., 8 Jun 2024).


Agentic Software Engineering (SE 3.0) consolidates a paradigm where humans and autonomous agents form symbiotic engineering teams, underpinning reproducible, scalable, and auditable development systems. It is defined by deeply structured processes, formalized collaboration, and rigorous governance, bridging technical, educational, and societal challenges toward the future of trustworthy, agent-native software systems.