Offloading MPI Parallel Prefix Scan (MPI_Scan) with the NetFPGA (1408.4939v1)

Abstract: Parallel programs written using the standard Message Passing Interface (MPI) frequently depend upon the ability to efficiently execute collective operations. MPI_Scan is a collective operation defined in MPI that implements parallel prefix scan which is very useful primitive operation in several parallel applications. This operation can be very time consuming. In this paper, we explore the use of hardware programmable network interface cards utilizing standard media access protocols for offloading the MPI_Scan operation to the underlying network. Our work is based upon the NetFPGA - a programmable network interface with an on-board Virtex FPGA and four Ethernet interfaces. We have implemented a network-level MPI_Scan operation using the NetFPGA for use in MPI environments. This paper compares the performance of this implementation with MPI over Ethernet for a small configuration.