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Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light (1406.1603v1)

Published 6 Jun 2014 in q-bio.NC, physics.bio-ph, and physics.optics

Abstract: Recent efforts in neuroscience research seek to obtain detailed anatomical neuronal wiring maps as well as information on how neurons in these networks engage in dynamic activities. Although the entire connectivity map of the nervous system of C. elegans has been known for more than 25 years, this knowledge has not been sufficient to predict all functional connections underlying behavior. To approach this goal, we developed a two-photon technique for brain-wide calcium imaging in C. elegans using wide-field temporal focusing (WF-TEFO). Pivotal to our results was the use of a nuclear-localized, genetically encoded calcium indicator (NLS-GCaMP5K) that permits unambiguous discrimination of individual neurons within the densely-packed head ganglia of C. elegans. We demonstrate near-simultaneous recording of activity of up to 70% of all head neurons. In combination with a lab-on-a-chip device for stimulus delivery, this method provides an enabling platform for establishing functional maps of neuronal networks.

Citations (314)

Summary

  • The paper introduces a novel imaging approach combining WF-TEFO with NLS-GCaMP5K to capture nearly 70% of neurons in the C. elegans head.
  • Methodology advances enable high temporal and spatial resolution by achieving volumetric imaging rates of 4-6 Hz.
  • Results reveal distinct neuronal clusters and functional connectivity, establishing a benchmark for mapping neural circuits.

Brain-wide 3D Imaging of Neuronal Activity in Caenorhabditis elegans with Sculpted Light

The paper by Schrödel et al. presents an innovative approach to imaging neuronal activity across the entire head region of the nematode Caenorhabditis elegans, utilizing a technique known as wide-field temporal focusing (WF-TEFO) in combination with a genetically encoded calcium indicator, NLS-GCaMP5K. The authors address a significant gap in neuroscience—the ability to capture dynamic neuronal activity in a mapped, yet functionally complex, nervous system at single-neuron resolution.

Methodological Advancements

The core innovation lies in the combination of WF-TEFO, a two-photon excitation technique, with a nucleus-localized calcium sensor (NLS-GCaMP5K). This approach allows near-simultaneous acquisition of calcium dynamics from approximately 70% of all neurons in the C. elegans head ganglia, overcoming the spatial constraints that typically hinder multi-cell imaging in densely packed neuronal tissues. The technique retains both high temporal and spatial resolution, enabling the discrimination of individual neurons necessary for functional mapping.

By encoding the calcium indicator within the nuclei of neurons, the technique achieves enhanced clarity and accuracy in tracking neuronal activity. The authors further integrate this imaging technique with a microfluidic device designed to deliver timely chemical stimuli, thus creating a highly controlled experimental environment.

Results and Implications

The imaging setup achieved notable volumetric acquisition rates (~4-6 Hz), proving sufficient to resolve fast and slow calcium dynamics in neurons like URX and BAG, which are responsive to changes in oxygen levels. Such fine temporal resolution supports the exploration of correlative and anticorrelative patterns in high-density neuronal populations. In unstimulated nematode specimens, these imaging capabilities reveal distinct clusters of correlated neurons, some showing internal symmetry, indicating functional connectivity amidst pre-motor interneuron classes such as AVA, AVE, AIB, and RIM.

These findings endorse the hypothesis that broader system-wide correlations exist in the nematode brain, possibly underlying behavioral phenomena such as locomotion and sensory integration. The high degree of correlation in neuronal activity highlights the interconnected nature of C. elegans' neural circuitry, aligning well with its anatomical connectome.

Future Directions

The paper sets a benchmark for functional neural imaging in small model organisms, with direct applicability to larger-scale neural systems in more complex species. The broadened field of view and enhanced resolution pave the way for investigating neuronal dynamics in organisms with similarly mapped connectomes. Moving forward, combining this imaging technique with optogenetics or electrophysiological recording could significantly advance our understanding of neural circuit function in real-time adaptive behaviors.

The implications extend to leverage these techniques in comparative connectomics, offering potential insights into conserved mechanisms of neural processing across species. Furthermore, exploring how these neuronal networks modulate behavior under various stimuli could generate invaluable insights into sensory and decision-making processes prevalent in broader biological contexts.

Conclusion

Schrödel et al.'s paper contributes a robust methodological framework for imaging and analyzing neuronal activities across densely structured neural tissues in model organisms like C. elegans. This research not only fills critical gaps in functional connectomics but also establishes a versatile platform for advancing our understanding of neural circuits and their systemic contributions to behavior. As this technology evolves, it holds promise for deepening the exploration of neural architectures beyond C. elegans, scaling up toward the exploration of more intricate brain systems.

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