Test EASAL-UC on benchmark tasks for configurational entropy, free energy, binding affinity, and hot-spot residues
Test and evaluate EASAL-UC on benchmark datasets for Lennard-Jones clusters, ligand docking, and computational alanine scanning to assess its performance in computing configurational entropy, free energy, binding affinity, and hot-spot residue metrics.
References
It remains to test EASAL-UC for configurational entropy, free energy, binding affinity, and hot-spot residue computations on well known benchmark datasets for Lennard-Jones clusters, ligand docking and computational alanine scanning [trombach2018, jankauskaite2018skempi, argawal2019docking].
— Best of two worlds: Cartesian sampling and volume computation for distance-constrained configuration spaces using Cayley coordinates
(2408.16946 - Zhang et al., 29 Aug 2024) in Section 6: Future Work