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Accuracy Gains from Fully All-Atom NNPs for Large Systems

Ascertain whether simulating entire biomolecular systems at an all-atom level, including solvent, using neural network potentials would yield a significant accuracy improvement over classical molecular mechanics for large systems, given current impractical runtime compared to classical methods.

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Background

While the ultimate goal is end-to-end all-atom simulations using neural network potentials with quantum-chemistry-level accuracy, current implementations cannot match the speed of classical force fields at the scale of entire solvated biomolecular systems. Beyond the computational barrier, it remains unknown whether such all-atom NNP simulations would deliver materially better accuracy for large systems.

References

Ultimately, the goal is to simulate entire systems at an all-atom level, including the solvent, with the accuracy of quantum chemistry (Figure 2f) using NNPs. However, there are currently no practical methods to compete with the speed of classical potentials on such a big number of atoms, and it is unclear if this would significantly improve accuracy for large systems.