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Time for a change: a tutorial for comparing multiple classifiers through Bayesian analysis (1606.04316v3)

Published 14 Jun 2016 in stat.ML and cs.LG

Abstract: The machine learning community adopted the use of null hypothesis significance testing (NHST) in order to ensure the statistical validity of results. Many scientific fields however realized the shortcomings of frequentist reasoning and in the most radical cases even banned its use in publications. We should do the same: just as we have embraced the Bayesian paradigm in the development of new machine learning methods, so we should also use it in the analysis of our own results. We argue for abandonment of NHST by exposing its fallacies and, more importantly, offer better - more sound and useful - alternatives for it.

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Summary

  • The paper introduces a Bayesian framework to assess classifier performance beyond the limitations of traditional NHST.
  • It employs a Bayesian correlated t-test and hierarchical models to analyze cross-validation outcomes and multiple datasets.
  • The study emphasizes practical equivalence and probabilistic reasoning to improve interpretability in machine learning comparisons.

Bayesian Methods for Comparative Classifier Analysis

The paper, "Time for a Change: a Tutorial for Comparing Multiple Classifiers Through Bayesian Analysis," authored by Alessio Benavoli, Giorgio Corani, Janez Demšar, and Marco Zaffalon, addresses the prevalent use of null hypothesis significance testing (NHST) in classifier comparison within the machine learning field and advocates for a Bayesian approach. This transition is argued with the intention of improving the robustness and interpretability of statistical assertions often made in the domain.

The research begins by critiquing NHST, elaborating on its limitations such as its tendency to provoke "black and white thinking," misinterpretation of pp-values, dependence on sample size, and its incapacity to answer questions regarding the probabilities of hypotheses. Specifically, it highlights that NHST fundamentally fails to provide a direct assessment of practical equivalence or difference, a necessity for meaningful interpretations of classifier performances.

To address these issues, the authors introduce Bayesian analysis as a viable alternative, employing a framework that provides a richer, probabilistic interpretation of results. They elucidate on the Bayesian correlated tt-test as a means to analyze cross-validation results, thus accommodating the correlation due to overlapping training sets in cross-validation. This model accounts for differences in data sets with the construction of priors, ultimately presenting more informative conclusions regarding the performance of classifiers. The Bayesian model effectively offers posterior distributions that can be queried for insights into practical equivalence and effect size.

The paper further extends Bayesian analysis to multiple datasets, referencing the Wilcoxon signed-rank test and its Bayesian counterpart based on the Dirichlet process. This non-parametric Bayesian approach accounts for potential asymmetries in data distribution, circumventing assumptions required by traditional parametric tests. It provides a mechanism for probabilistically assessing whether classifiers are practically equivalent across several datasets.

Of particular note is the introduction of a Bayesian hierarchical model, a comprehensive method for comparing classifiers based on multiple data sets. This model incorporates cross-validation results, accommodating the full variability of the data and invoking shrinkage to jointly estimate cluster-level means. These models allow for posterior predictive checks to estimate the performance on unseen datasets, adding predictive validity to the analyses.

The implications of transitioning from NHST to Bayesian methods in machine learning extend beyond improving statistical analysis; they embrace a philosophical shift towards probabilistic reasoning in evaluating classifier performance. The technology provides a structured means for assessing equivalences and differences practically, rather than nominally.

Future developments could refine these methodologies further, particularly in offering more computationally efficient implementations and expanding the utility of these tests across various machine learning paradigms. Additionally, wider adoption of Bayesian approaches could drive methodological uniformity in research publications, enhancing the reliability and coherence of classifier comparison studies across the field.

In conclusion, the paper presents a compelling case for eschewing NHST in favor of Bayesian approaches within the machine learning community. Through comprehensive analysis and robust examples, it argues that Bayesian methods can more effectively address the nuanced questions of classifier performance that practitioners seek to answer, thereby paving the way for a more nuanced and reliable understanding of machine learning models.

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