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The Power of the Pareto Front: Balancing Uncertain Rewards for Adaptive Experimentation in scanning probe microscopy (2504.06525v1)

Published 9 Apr 2025 in cs.LG, cond-mat.mes-hall, cond-mat.mtrl-sci, and cs.AI

Abstract: Automated experimentation has the potential to revolutionize scientific discovery, but its effectiveness depends on well-defined optimization targets, which are often uncertain or probabilistic in real-world settings. In this work, we demonstrate the application of Multi-Objective Bayesian Optimization (MOBO) to balance multiple, competing rewards in autonomous experimentation. Using scanning probe microscopy (SPM) imaging, one of the most widely used and foundational SPM modes, we show that MOBO can optimize imaging parameters to enhance measurement quality, reproducibility, and efficiency. A key advantage of this approach is the ability to compute and analyze the Pareto front, which not only guides optimization but also provides physical insights into the trade-offs between different objectives. Additionally, MOBO offers a natural framework for human-in-the-loop decision-making, enabling researchers to fine-tune experimental trade-offs based on domain expertise. By standardizing high-quality, reproducible measurements and integrating human input into AI-driven optimization, this work highlights MOBO as a powerful tool for advancing autonomous scientific discovery.

Summary

An Expert Overview of "The Power of the Pareto Front: Balancing Uncertain Rewards for Adaptive Experimentation in Scanning Probe Microscopy"

The paper, "The Power of the Pareto Front: Balancing Uncertain Rewards for Adaptive Experimentation in Scanning Probe Microscopy," presents an in-depth analysis of Multi-Objective Bayesian Optimization (MOBO) for automated experimentation, specifically within the context of scanning probe microscopy (SPM). This research stands as a testament to the prowess of MOBO in optimizing multiple uncertain and potentially conflicting rewards to enhance experimental efficiency and quality.

The core contribution of this work lies in its demonstration of MOBO's application to SPM, an imaging modality foundational to material science research. By deploying MOBO, the authors have optimized tapping mode parameters to achieve high-quality, reproducible imaging, thereby aligning with the FAIR principles for data management. At the heart of this method is the calculation and utilization of the Pareto front, which ensures a balanced optimization of multiple objectives. This frontier aids in elucidating the trade-offs among different experimental goals, thereby providing rich, context-dependent insights into experimental parameter selection.

Parametrically, MOBO leverages Gaussian processes to model the objective functions, facilitating a rational exploration-exploitation trade-off through an acquisition function, specifically q-Noisy Expected Hypervolume Improvement. This function strategically selects subsequent experimental parameters to maximize performance across these reward functions: trace-retrace height alignment, probe-sample proximity, and phase maintenance in the attractive mode. The paper provides strong numerical evidence indicating that MOBO achieves optimal parameter settings in a minimal number of iterations.

Crucially, the research introduces a mechanism for human-in-the-loop decision-making, allowing researchers to dynamically adjust the weights of different objectives according to their experimental priorities. This feature is particularly valuable in SPM, where certain objectives such as minimizing phase changes or optimizing trace-retrace alignment may take precedence depending on specific experimental conditions. The dynamic flexibility provided by MOBO potentially minimizes human error and enhances reproducibility.

An analysis of the Pareto front reveals the interactions and necessary trade-offs between competing objectives, such as the evident competition between phase maintenance and tip-sample distance optimization. Such insights reinforce the advantage of MOBO in handling complex multi-layered experimental challenges, where single-objective optimization rigidly applied can be limiting.

The implications of this research are twofold. Practically, it offers a powerful framework for automated experimentation, promising to significantly streamline experimental workflows in SPM and analogous fields. Theoretically, it enriches the discourse on adaptive experimentation by demonstrating the robust applicability of Pareto-optimal strategies in real-world settings.

In conclusion, this research not only underscores the effectiveness of MOBO in balancing conflicting rewards but also highlights the potential for AI-driven methodologies to dynamically incorporate human expertise within scientific experimentation. Future work could potentially involve extending the MOBO framework to other experimental platforms, thereby further enhancing its utility in diverse scientific domains. Moreover, additional research into refining reward function definitions will likely advance multi-objective optimization techniques, providing a more refined understanding of trade-offs and synergy between competing experimental objectives.

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