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ChemAgent: Self-updating Library in Large Language Models Improves Chemical Reasoning (2501.06590v1)

Published 11 Jan 2025 in cs.CL and cs.AI

Abstract: Chemical reasoning usually involves complex, multi-step processes that demand precise calculations, where even minor errors can lead to cascading failures. Furthermore, LLMs encounter difficulties handling domain-specific formulas, executing reasoning steps accurately, and integrating code effectively when tackling chemical reasoning tasks. To address these challenges, we present ChemAgent, a novel framework designed to improve the performance of LLMs through a dynamic, self-updating library. This library is developed by decomposing chemical tasks into sub-tasks and compiling these sub-tasks into a structured collection that can be referenced for future queries. Then, when presented with a new problem, ChemAgent retrieves and refines pertinent information from the library, which we call memory, facilitating effective task decomposition and the generation of solutions. Our method designs three types of memory and a library-enhanced reasoning component, enabling LLMs to improve over time through experience. Experimental results on four chemical reasoning datasets from SciBench demonstrate that ChemAgent achieves performance gains of up to 46% (GPT-4), significantly outperforming existing methods. Our findings suggest substantial potential for future applications, including tasks such as drug discovery and materials science. Our code can be found at https://github.com/gersteinlab/chemagent

Improved Chemical Reasoning with ChemAgent: A Self-Updating Library for LLMs

The paper introduces ChemAgent, a novel framework designed to enhance chemical reasoning in LLMs by deploying a dynamic, self-updating library system. Chemical reasoning involves intricate calculations and multi-step processes where precision is paramount. The existing capabilities of LLMs in such specialized domains are notably constrained, especially given the complexity inherent to chemistry where error propagation from minor inaccuracies can significantly affect outcomes.

Overview of ChemAgent

ChemAgent's primary innovation is its deployment of a dynamic library that effectively decomposes chemical tasks into more manageable sub-tasks, compiling solutions into a structured collection. This collection serves as a reference for future queries, thus addressing major drawbacks in the existing capabilities of LLMs, particularly when executing precise chemical calculations or effectively leveraging domain-specific formulas.

The Structure of ChemAgent

The library system within ChemAgent consists of three main memory types:

  1. Planning Memory: Contains high-level strategies and methodologies for approaching chemical problems.
  2. Execution Memory: Comprises structured problem contexts alongside corresponding solutions, serving as detailed execution plans.
  3. Knowledge Memory: Houses core chemistry principles and formulas, dynamically generated during the task solving process.

This memory infrastructure allows LLMs to improve incrementally based on experience, enabling adaptive learning akin to human problem-solving.

Methodology and Implementation

ChemAgent was tested on four chemical reasoning datasets from SciBench, where it registered performance improvements of up to 46% (in the case of GPT-4). Unlike prior approaches that often relied heavily on fixed workflows and human-curated data, ChemAgent emulates human-like learning by updating its library through experience with a continuous improvement trajectory. By using self-improving mechanisms akin to human cognitive processes, ChemAgent represents a significant advancement in computational chemistry, yielding improvements across a spectrum of model settings. Notably, ChemAgent facilitated substantial performance gains over both direct reasoning models and Python-augmented reasoning frameworks, demonstrating its utility across varying model capabilities.

Analytical Insights and Implications

ChemAgent's performance improvements underscore the potential for artificial intelligence to transform domains where precision and compound reasoning are critical. The dynamic updating process embedded within ChemAgent not only accentuates its ability to handle increasingly complex problems effectively but also positions it as a valuable tool in areas such as drug discovery and materials science, where similar reasoning demands prevail.

The framework's structure naturally lends itself to adaptation in other technical fields requiring composite reasoning and detailed analytical processes, suggesting the potential for broader application beyond chemistry.

Conclusions and Future Directions

ChemAgent marks a significant step forward in leveraging artificial intelligence for intricate scientific reasoning tasks. By creating a system that mimics human-like problem-solving capabilities and learning processes, this approach provides insights into the future role of AI in specialized academic and industrial applications. Future research could aim at refining ChemAgent for other technical domains, enhancing its memory system, and optimizing its processes to address even more complex problem-solving scenarios in chemistry and related fields.

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Authors (12)
  1. Xiangru Tang (62 papers)
  2. Tianyu Hu (9 papers)
  3. Muyang Ye (3 papers)
  4. Yanjun Shao (10 papers)
  5. Xunjian Yin (17 papers)
  6. Siru Ouyang (22 papers)
  7. Wangchunshu Zhou (73 papers)
  8. Pan Lu (42 papers)
  9. Zhuosheng Zhang (125 papers)
  10. Yilun Zhao (59 papers)
  11. Arman Cohan (121 papers)
  12. Mark Gerstein (25 papers)
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