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Deep Recurrent Survival Analysis

Published 7 Sep 2018 in cs.LG and stat.ML | (1809.02403v2)

Abstract: Survival analysis is a hotspot in statistical research for modeling time-to-event information with data censorship handling, which has been widely used in many applications such as clinical research, information system and other fields with survivorship bias. Many works have been proposed for survival analysis ranging from traditional statistic methods to machine learning models. However, the existing methodologies either utilize counting-based statistics on the segmented data, or have a pre-assumption on the event probability distribution w.r.t. time. Moreover, few works consider sequential patterns within the feature space. In this paper, we propose a Deep Recurrent Survival Analysis model which combines deep learning for conditional probability prediction at fine-grained level of the data, and survival analysis for tackling the censorship. By capturing the time dependency through modeling the conditional probability of the event for each sample, our method predicts the likelihood of the true event occurrence and estimates the survival rate over time, i.e., the probability of the non-occurrence of the event, for the censored data. Meanwhile, without assuming any specific form of the event probability distribution, our model shows great advantages over the previous works on fitting various sophisticated data distributions. In the experiments on the three real-world tasks from different fields, our model significantly outperforms the state-of-the-art solutions under various metrics.

Citations (128)

Summary

  • The paper introduces DRSA, a model that integrates LSTM-based RNNs to capture temporal dependencies in survival data.
  • It employs a discrete time formulation to compute hazard rates using the probability chain rule, which enhances backpropagation.
  • Experimental results on clinical, customer engagement, and advertising datasets show superior time-dependent concordance and ANLP metrics.

Comprehensive Review of "Deep Recurrent Survival Analysis"

Introduction

The paper "Deep Recurrent Survival Analysis" presents a novel methodology for survival analysis, an area concerned with the modeling of time-to-event data, often characterized by censored observations. Traditional approaches to survival analysis typically rely on non-parametric methods like Kaplan-Meier or semi-parametric models such as the Cox proportional hazards model, both of which impose certain assumptions on the probability distributions or overlook the potential for personalized predictions. The authors introduce a deep learning-based approach that eschews these limitations by leveraging recurrent neural networks (RNNs) for enhanced modeling of sequential data, facilitating more nuanced event probability predictions over time.

Methodology

The authors propose the Deep Recurrent Survival Analysis (DRSA) model, which stands out by integrating RNNs to autonomously capture temporal dependencies inherent in survival data. This approach diverges from previous deep learning endeavors that merely adapted neural networks for feature extraction or imposed distributional assumptions akin to traditional models. DRSA instead focuses on modeling the conditional probability of event occurrence without pre-specifying a distribution form, enhancing its adaptability across diverse datasets.

Discrete Time Model

The discrete time model outlines the DRSA's fundamental framework, articulating hazard rates over discrete intervals. This formulation offers precision in survival rate calculations and enables the model to compute predictions by leveraging the probability chain rule—an approach that facilitates backpropagation through the model, enhancing gradient flow and ultimately contributing to more robust learning outcomes.

Deep Recurrent Model

The core of the DRSA model involves the strategic deployment of LSTM units to craft a recurrent structure that captures dynamic sequential patterns. This design allows for the prediction of event probabilities at each discrete time interval, adjusting these predictions conditional on prior observations—thereby encoding a deeper understanding of temporal correlations compared to non-recurrent or simpler feed-forward approaches. Figure 1

Figure 1: Detailed illustration of Deep Recurrent Survival Analysis (DRSA) model. Note that only the uncensored logs have the true event time and can calculate pzp_z for the loss LzL_z. The calculation of pzp_z and S(t)S(t) have been derived.

Experiments and Results

The DRSA model was rigorously evaluated across multiple real-world datasets encompassing diverse domains such as clinical data (CLINIC), customer engagement (MUSIC), and computational advertising (BIDDING). These experiments underscore DRSA's proficiency in both event-time prediction and survival rate estimation, achieving superior results over several metrics including the time-dependent concordance index and average negative log probability (ANLP). Figure 2

Figure 2: Learning curves. Here ``epoch'' means one iteration over the whole training data and α=0.25\alpha=0.25 in the optimization equation.

Implications and Future Work

The DRSA model offers significant improvements over existing models by dynamically tailoring predictions to individual data sequences, making it particularly beneficial for domains where personalized predictions are critical. Its versatility is visible in its enhanced model capacity to seamlessly adapt to various data distributions without the influencer of stringent assumptions.

Looking forward, the model opens pathways for further exploration into competing risks scenarios and multi-task extensions, wherein shared embeddings and joint optimization strategies could enhance predictive accuracies across intertwined tasks.

Conclusion

"Deep Recurrent Survival Analysis" introduces a groundbreaking shift in survival analysis modeling, harmonizing the flexibility of RNNs with survival data's temporal characteristics. Through meticulous evaluation, the model demonstrates the potential to set new benchmarks in predicting time-to-event probabilities, signifying a pivotal advancement in the field. Such methodologies are poised to foster robust applications spanning numerous fields, from healthcare to market analytics, suggesting a promising trajectory for future research endeavors. Figure 3

Figure 3: A comprehensive visualization of survival rate S(t∣xi)S(t|x^i) estimation and event time probability p(z∣xi)p(z|x^i) prediction over different models. The vertical dotted line marks the true event time ziz^i of this sample.

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