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Sequential Neural Likelihood: Fast Likelihood-free Inference with Autoregressive Flows (1805.07226v2)

Published 18 May 2018 in stat.ML and cs.LG

Abstract: We present Sequential Neural Likelihood (SNL), a new method for Bayesian inference in simulator models, where the likelihood is intractable but simulating data from the model is possible. SNL trains an autoregressive flow on simulated data in order to learn a model of the likelihood in the region of high posterior density. A sequential training procedure guides simulations and reduces simulation cost by orders of magnitude. We show that SNL is more robust, more accurate and requires less tuning than related neural-based methods, and we discuss diagnostics for assessing calibration, convergence and goodness-of-fit.

Citations (333)

Summary

  • The paper introduces SNL, which uses Masked Autoregressive Flows to approximate intractable likelihoods in complex simulator-based models.
  • It combines sequential simulation and MCMC methods to refine density estimates and significantly reduce simulation costs.
  • Experimental results show SNL outperforms traditional inference methods like ABC by ensuring accurate posterior calibration with fewer simulations.

A Comprehensive Analysis of Sequential Neural Likelihood: Fast Likelihood-free Inference with Autoregressive Flows

The paper introduces Sequential Neural Likelihood (SNL), a significant methodology enabling Bayesian inference in complex simulator-based models where likelihood functions remain intractable. By employing autoregressive flows for density estimation, SNL mitigates the prohibitive simulation costs characteristically associated with traditional likelihood-free inference.

Methodology and Implementation

At its core, SNL leverages a Masked Autoregressive Flow (MAF) for conditional neural density estimation. These flows estimate the conditional probability density of data given parameters, effectively functioning as surrogates for the unknown likelihoods. The sequential nature of SNL, combining Markov Chain Monte Carlo methods with autoregressive flows, iteratively refines likelihood models with each batch of simulations. This process purportedly curtails simulation requirements by magnitudes, optimizing computational resources while maintaining accuracy.

Unlike traditional approaches such as Synthetic Likelihood (SL) and Approximate Bayesian Computation (ABC), which often require extensive simulations to approximate posteriors effectively, SNL's integration of MAF drastically reduces these computational burdens. Additionally, its robustness to tuning and calibration advances it as a practical tool in various applications, from ecology's Lotka-Volterra models to intricate neural models like Hodgkin-Huxley.

Experimental Results and Performance

The paper's evaluation spans several domains, showcasing SNL's efficacy in both synthetic and realistic settings. Notably, SNL outperformed existing state-of-the-art methods across different metrics, particularly in simulation efficiency and posterior accuracy. For instance, in the M/G/1 queue model, SNL achieves superior parameter inference accuracy with fewer simulations. Additionally, the paper demonstrates that SNL is consistently well-calibrated, with rank statistics aligning closely with expected uniform distributions across varied scenarios.

Implications and Future Trajectories

SNL not only assures enhanced accuracy and reduced costs for likelihood-free inference but also opens avenues for deploying more generalized neural architectures without intensive fine-tuning. The flexibility in modeling the likelihood instead of the posterior circumvents several biases and computational inefficiencies evident in prior methodologies like SNPE-A and SNPE-B.

Looking ahead, SNL could pave the way for more adaptive inference techniques capable of handling high-dimensional data. The paper suggests that exploiting data structures further within neural density estimation frameworks could significantly extend SNL's applicability, especially in domains like probabilistic programming and hypothesis testing.

In summary, this paper significantly advances the state of likelihood-free inference. By eschewing biases through innovative neural architectures, it lays a robust foundation for future research and practical applications in diverse scientific fields requiring dynamic simulation modeling.