Stationary distribution approximations of Two-island Wright-Fisher and seed-bank models using Stein's method (2405.18763v1)
Abstract: We consider two finite population Markov chain models, the two-island Wright-Fisher model with mutation, and the seed-bank model with mutation. Despite the relatively simple descriptions of the two processes, the the exact form of their stationary distributions is in general intractable. For each of the two models we provide two approximation theorems with explicit upper bounds on the distance between the stationary distributions of the finite population Markov chains, and either the stationary distribution of a two-island diffusion model, or the beta distribution. We show that the order of the bounds, and correspondingly the appropriate choice of approximation, depends upon the relative sizes of mutation and migration. In the case where migration and mutation are of the same order, the suitable approximation is the two-island diffusion model, and if migration dominates mutation, then the weighted average of both islands is well approximated by a beta random variable. Our results are derived from a new development of Stein's method for the stationary distribution of the two-island diffusion model for the weak migration results, and utilising the existing framework for Stein's method for the Dirichlet distribution.
- Barbour, A. D. (1988). Stein’s method and Poisson process convergence. J. Appl. Probab., (Special Vol. 25A):175–184. A celebration of applied probability.
- Barbour, A. D. (1990). Stein’s method for diffusion approximations. Probab. Theory Related Fields, 84(3):297–322.
- An introduction to Stein’s method, volume 4 of Lecture Notes Series. Institute for Mathematical Sciences. National University of Singapore. Singapore University Press, Singapore; World Scientific Publishing Co. Pte. Ltd., Hackensack, NJ. Lectures from the Meeting on Stein’s Method and Applications: a Program in Honor of Charles Stein held at the National University of Singapore, Singapore, July 28–August 31, 2003.
- Poisson approximation, volume 2 of Oxford Studies in Probability. The Clarendon Press, Oxford University Press, New York. Oxford Science Publications.
- Structural properties of the seed bank and the two island diffusion. J. Math. Biol., 79(1):369–392.
- A new coalescent for seed-bank models. Ann. Appl. Probab., 26(2):857–891.
- Negative binomial approximation with Stein’s method. Methodol. Comput. Appl. Probab., 1(4):407–421.
- Stein’s method and birth-death processes. Ann. Probab., 29(3):1373–1403.
- The stationary distribution of a sample from the Wright-Fisher diffusion model with general small mutation rates. J. Math. Biol., 78(4):1211–1224.
- Chatterjee, S. (2014). A short survey of Stein’s method. In Proceedings of the International Congress of Mathematicians—Seoul 2014. Vol. IV, pages 1–24. Kyung Moon Sa, Seoul.
- Exchangeable pairs and Poisson approximation. Probab. Surv., 2:64–106.
- Exponential approximation by Stein’s method and spectral graph theory. ALEA Lat. Am. J. Probab. Math. Stat., 8:197–223.
- Multivariate normal approximation using exchangeable pairs. ALEA Lat. Am. J. Probab. Math. Stat., 4:257–283.
- Nonnormal approximation by Stein’s method of exchangeable pairs with application to the Curie-Weiss model. Ann. Appl. Probab., 21(2):464–483.
- Chen, L. H. Y. (1975). Poisson approximation for dependent trials. Ann. Probability, 3(3):534–545.
- Döbler, C. (2015). Stein’s method of exchangeable pairs for the beta distribution and generalizations. Electron. J. Probab., 20:no. 109, 34.
- Markov processes. Wiley Series in Probability and Mathematical Statistics: Probability and Mathematical Statistics. John Wiley & Sons, Inc., New York. Characterization and convergence.
- Fisher, R. (1930). The genetical theory of natural selection. Clarendon Press.
- Exponential approximation and Stein’s method of exchangeable pairs. ALEA Lat. Am. J. Probab. Math. Stat., 10(1):1–13.
- Dirichlet approximation of equilibrium distributions in Cannings models with mutation. Adv. in Appl. Probab., 49(3):927–959.
- Stein’s method for the Poisson-Dirichlet distribution and the Ewens sampling formula, with applications to Wright-Fisher models. Ann. Appl. Probab., 31(2):625–667.
- Stein’s method for the beta distribution and the Pólya-Eggenberger urn. J. Appl. Probab., 50(4):1187–1205.
- Götze, F. (1991). On the rate of convergence in the multivariate CLT. Ann. Probab., 19(2):724–739.
- On the notion(s) of duality for Markov processes. Probab. Surv., 11:59–120.
- Principles of seed banks and the emergence of complexity from dormancy. Nat Commun, (12):4807.
- Microbial seed banks: the ecological and evolutionary implications of dormancy. Nat. Rev. Microbiol., 9(2):119–130.
- Stein’s method for comparison of univariate distributions. Probability Surveys, 14:1–52.
- Separation of time scales and convergence to the coalescent in structured populations. Modern developments in theoretical population genetics: The legacy of Gustave Malécot, 194:232.
- Multivariate normal approximation with Stein’s method of exchangeable pairs under a general linearity condition. Ann. Probab., 37(6):2150–2173.
- On coupling constructions and rates in the CLT for dependent summands with applications to the antivoter model and weighted U𝑈Uitalic_U-statistics. Ann. Appl. Probab., 7(4):1080–1105.
- Röllin, A. (2007). Translated Poisson approximation using exchangeable pair couplings. Ann. Appl. Probab., 17(5-6):1596–1614.
- Röllin, A. (2008). A note on the exchangeability condition in Stein’s method. Statist. Probab. Lett., 78(13):1800–1806.
- Ross, N. (2011). Fundamentals of Stein’s method. Probab. Surv., 8:210–293.
- Evolution with a seed bank: the population genetic consequences of microbial dormancy. Evol Appl., 11(1):60–75.
- Stein, C. (1972). A bound for the error in the normal approximation to the distribution of a sum of dependent random variables. In Proceedings of the Sixth Berkeley Symposium on Mathematical Statistics and Probability (Univ. California, Berkeley, Calif., 1970/1971), Vol. II: Probability theory, pages 583–602. Univ. California Press, Berkeley, Calif.
- Wright, S. (1931). Evolution in mendelian populations. Genetics, 16(2):97.