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A Diffusion MRI model for axonal damage quantification based on axial diffusivity reduction in axons: a Monte Carlo simulation study (2403.06140v3)

Published 10 Mar 2024 in cs.CE

Abstract: Axonal damage is the primary pathological correlate of long-term impairment in multiple sclerosis (MS). Previous work has demonstrated a strong, quantitative relationship between decrease in axial diffusivity and axonal damage. In the present work, we develop an extension of diffusion basis spectrum imaging (DBSI) which can be used to quantify the fraction of diseased and healthy axons based on reduction in axial diffusivity in axons. In this novel method, we model the MRI signal with the axial diffusion (AD) spectrum for each fiber orientation and use two component restricted anisotropic diffusion spectrum (RADS) to model the anisotropic component of the diffusion-weighted MRI signal. Diffusion coefficients and signal fractions are computed for the optimal model with the lowest Bayesian information criterion (BIC) score. This gives us the fractions of diseased and healthy axons. We test our method using Monte-Carlo (MC) simulations with the MC simulation package developed as part of this work. The simulation geometry for the voxel includes uniformly spaced cylinders to model axons, and uniformly spaced spheres to model extra-axonal cells. First we test and validate our MC simulations for the basic RADS model. It accurately recovers the fiber and cell fractions simulated, as well as the simulated diffusivities. For testing and validating RADS to quantify axonal damage, we simulate different fractions of diseased and healthy axons. Our method produces highly accurate quantification of diseased and healthy axons with Pearson's correlation (predicted vs true proportion) of r = 0.98 (p-value = 0.001); the one Sample t-test for proportion error gives the mean error of 2% (p-value = 0.034). Furthermore, the method recovers the axial diffusivities of the diseased and healthy axons very accurately with mean error of 4% (p-value = 0.001).

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References (26)
  1. Anderson AW. Measurement of fiber orientation distributions using high angular resolution diffusion imaging. Magn Reson Med., 54(5):1194–1206, 2005.
  2. Axial diffusivity is the primary correlate of axonal injury in the experimental autoimmune encephalomyelitis spinal cord: A quantitative pixelwise analysis. Journal of Neuroscience, 29(9):2805–2813, 2009.
  3. Diffusion tensor mr imaging of the human brain; 201(3). pages 637–648. Radiology, 1996.
  4. Quantifying white matter tract diffusion parameters in the presence of increased extra-fiber cellularity and vasogenic edema. NeuroImage, 101:310–319, 2014.
  5. A. Compston and A. Coles. Multiple sclerosis. Lancet (London, England), 359(9313):1221–1231, 2002.
  6. A. Einstein. Über die von der molekularkinetischen theorie der wärme geforderte bewegung von in ruhenden flüssigkeiten suspendierten teilchen. Annalen der Physik, 322(8):549–560, 1905.
  7. Incidence and Prevalence of Multiple Sclerosis in the Americas: A Systematic Review. Neuroepidemiology, 40(3):195–210, 01 2013.
  8. Detecting axon damage in spinal cord from a mouse model of multiple sclerosis. Neurobiology of Disease, 21(3):626–632, 2006.
  9. Radial diffusivity predicts demyelination in ex vivo multiple sclerosis spinal cords. NeuroImage, 55(4):1454–1460, 2011.
  10. Advanced multicompartment diffusion mri models and their application in multiple sclerosis. American Journal of Neuroradiology, 41(5):751–757, 2020.
  11. Diagnosis and Treatment of Multiple Sclerosis: A Review. JAMA, 325(8):765–779, 02 2021.
  12. Increased diffusivity in acute multiple sclerosis lesions predicts risk of black hole. Neurology, 74(21):1694–1701, 2010.
  13. Radial diffusivity in remote optic neuritis discriminates visual outcomes. Neurology, 74(21):1702–1710, 2010.
  14. Estimation of the effective self-diffusion tensor from the nmr spin echo. J Magn Reson B, 103(3):247–254, 1994.
  15. Non-invasive quantification of inflammation, axonal and myelin injury in multiple sclerosis. Brain, 144(1):213–223, 11 2020.
  16. Gideon Schwarz. Estimating the dimension of a model. Ann. Statist., 6(2):461–464, 03 1978.
  17. Histopathological correlation of diffusion basis spectrum imaging metrics of a biopsy-proven inflammatory demyelinating brain lesion: A brief report. Multiple Sclerosis Journal, 25(14):1937–1941, 2019. PMID: 29992856.
  18. Diffusion tensor imaging detects and differentiates axon and myelin degeneration in mouse optic nerve after retinal ischemia. NeuroImage, 20(3):1714–1722, 2003.
  19. Spin diffusion measurements: spin echoes in the presence of a time-dependent field gradient. The journal of chemical physics, 42(1):288–292, 1965.
  20. Diffusion basis spectrum imaging provides insights into ms pathology. Neurology - Neuroimmunology Neuroinflammation, 7(2), 2020.
  21. Differential sensitivity of in vivo and ex vivo diffusion tensor imaging to evolving optic nerve injury in mice with retinal ischemia. NeuroImage, 32(3):1195–1204, 2006.
  22. Noninvasive detection of cuprizone induced axonal damage and demyelination in the mouse corpus callosum. Magn Reson Med, 55:302–8, 2006.
  23. Amanuel Alemu Abajobir Valery L Feigin and et al. Kalkidan Hassen Abate. Global, regional, and national burden of neurological disorders during 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. Lancet Neurol. Nov; 16(11): 877–897., 16(11):877–897, Nov. 2017.
  24. Marinus T. Vlaardingerbroek and Jacques A. den Boer. Magnetic Resonance Imaging: Theory and Practice, pages 67–68. Springer Berlin Heidelberg, Berlin, Heidelberg, 2003.
  25. The prevalence of ms in the united states. Neurology, 92(10):e1029–e1040, 2019.
  26. Quantification of increased cellularity during inflammatory demyelination. Brain : a journal of neurology, 134 Pt 12:3590–601, 2011.

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