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How boundary interactions dominate emergent driving of passive probes in active matter (2401.09227v1)

Published 17 Jan 2024 in cond-mat.soft

Abstract: Colloidal probes immersed in an active bath have been found to behave like active particles themselves. Here, we use coarse-grained simulations to investigate the mechanisms behind this behavior. We find that the active motion of the colloid cannot be simply attributed to the convective motion in the bath. Instead, the boundary of the probe contributes significantly to these adopted dynamics by causing active bath particles to spontaneously accumulate at the probe. This gathering of active bath particles then pushes the probe, thus promoting its emergent active-particle-like behavior. Furthermore, we find that the dynamic properties of the probe depend on its size in a non-monotonic way, which further highlights the non-trivial interplay between probe and bath.

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References (61)
  1. Hydrodynamic phenomena in suspensions of swimming microorganisms. Annual Review of Fluid Mechanics, 24(1):313–358, 1992.
  2. Enhancement of biomixing by swimming algal cells in two-dimensional films. Proceedings of the National Academy of Sciences, 108(26):10391–10395, 2011.
  3. Enhanced diffusion in active intracellular transport. Phys. Rev. Lett., 85:5655–5658, Dec 2000.
  4. Particle diffusion in a quasi-two-dimensional bacterial bath. Phys. Rev. Lett., 84:3017–3020, 3 2000.
  5. Hydrodynamic collective effects of active protein machines in solution and lipid bilayers. Proceedings of the National Academy of Sciences, 112(28):E3639–E3644, 2015.
  6. Dynamics of enhanced tracer diffusion in suspensions of swimming eukaryotic microorganisms. Phys. Rev. Lett., 103:198103, Nov 2009.
  7. Statistics of colloidal suspensions stirred by microswimmers. Phys. Rev. Lett., 122:148101, Apr 2019.
  8. Induced diffusion of tracers in a bacterial suspension: theory and experiments. Journal of Fluid Mechanics, 729:423–444, 2013.
  9. Loopy lévy flights enhance tracer diffusion in active suspensions. Nature, 579(7799):364–367, March 2020.
  10. Gauging nanoswimmer dynamics via the motion of large bodies. Phys. Rev. Lett., 129:254502, Dec 2022.
  11. Effective dynamics of tracer in active bath: A mean-field theory study, 2021.
  12. Interacting brownian dynamics in a nonequilibrium particle bath. Physical Review E, 94, 10 2016.
  13. Vorticity determines the force on bodies immersed in active fluids. Phys. Rev. Lett., 126:138002, Mar 2021.
  14. The force on a body in active matter, 2015.
  15. The curved kinetic boundary layer of active matter. Soft Matter, 14(2):279–290, 2018.
  16. Tracer dynamics in crowded active-particle suspensions. Soft Matter, 17:10492–10504, 2021.
  17. Generic long-range interactions between passive bodies in an active fluid. Physical Review Letters, 120(5), January 2018.
  18. Bodies in an interacting active fluid: far-field influence of a single body and interaction between two bodies. Journal of Statistical Mechanics: Theory and Experiment, 2020(6):063211, June 2020.
  19. Passive probe particle in an active bath: can we tell it is out of equilibrium? Soft Matter, 18:6965–6973, 2022.
  20. Self-starting micromotors in a bacterial bath. Physical Review Letters, 102(4), January 2009.
  21. Numerical Simulations of Active Brownian Particles, pages 211–238. Springer International Publishing, Cham, 2019.
  22. Active particles in complex and crowded environments. Rev. Mod. Phys., 88:045006, Nov 2016.
  23. Swim pressure: Stress generation in active matter. Phys. Rev. Lett., 113:028103, Jul 2014.
  24. Freezing and phase separation of self-propelled disks. Soft Matter, 10:2132–2140, 2014.
  25. Pressure and phase equilibria in interacting active brownian spheres. Phys. Rev. Lett., 114:198301, May 2015.
  26. Effective langevin equations for a polar tracer in an active bath. New Journal of Physics, 22(11):113025, nov 2020.
  27. Curvature-induced activation of a passive tracer in an active bath. Phys. Rev. E, 90:032309, Sep 2014.
  28. Aggregation and segregation of confined active particles. Soft Matter, 10:6477–6484, 2014.
  29. Hydrodynamic attraction of swimming microorganisms by surfaces. Physical Review Letters, 101(3), jul 2008.
  30. Accumulation of microswimmers near a surface mediated by collision and rotational brownian motion. Phys. Rev. Lett., 103:078101, Aug 2009.
  31. Accumulation of swimming bacteria near a solid surface. Phys. Rev. E, 84:041932, Oct 2011.
  32. Transport of a dilute active suspension in pressure-driven channel flow. Journal of Fluid Mechanics, 777:482–522, 2015.
  33. Detention times of microswimmers close to surfaces: Influence of hydrodynamic interactions and noise. Phys. Rev. Lett., 115:038101, Jul 2015.
  34. Active brownian particles near straight or curved walls: Pressure and boundary layers. Physical Review E, 97(3), mar 2018.
  35. Ciliary contact interactions dominate surface scattering of swimming eukaryotes. Proceedings of the National Academy of Sciences of the United States of America, 110, 01 2013.
  36. Hartmut Löwen. Inertial effects of self-propelled particles: From active brownian to active langevin motion. The Journal of Chemical Physics, 152(4):040901, Jan 2020.
  37. Inertial effects on the stress generation of active fluids. Phys. Rev. Fluids, 2:094305, Sep 2017.
  38. Inertial delay of self-propelled particles. Nature Communications, 9:5156, 12 2018.
  39. Hidden entropy production and work fluctuations in an ideal active gas. Phys. Rev. E, 98:020604(R), Aug 2018.
  40. Enhanced diffusion and ordering of self-propelled rods. Phys. Rev. Lett., 101:268101, Dec 2008.
  41. Motility-induced temperature difference in coexisting phases. Phys. Rev. Lett., 123:228001, Nov 2019.
  42. Local stress and pressure in an inhomogeneous system of spherical active brownian particles. Scientific Reports, 9:6608, 04 2019.
  43. Time-dependent inertia of self-propelled particles: The langevin rocket. Phys. Rev. E, 103:042601, Apr 2021.
  44. Force renormalization for probes immersed in an active bath, 2023.
  45. Role of Repulsive Forces in Determining the Equilibrium Structure of Simple Liquids. J. Phys. Chem., 54(12):5237–5247, June 1971.
  46. S. Plimpton. Fast parallel algorithms for short-range molecular dynamics, 1995.
  47. Sergei Izvekov. Microscopic derivation of particle-based coarse-grained dynamics. The Journal of Chemical Physics, 138(13):134106, 04 2013.
  48. Introducing memory in coarse-grained simulations. J. Phys. Chem. B, 125:4931, 2021.
  49. Equation of motion for coarse-grained simulation based on microscopic description. Phys. Rev. E, 75:051109, May 2007.
  50. Fluctuation-dissipation relations far from equilibrium: a case study. Soft matter, 17(26):6413—6425, July 2021.
  51. Sergei Izvekov. Mori-zwanzig projection operator formalism: Particle-based coarse-grained dynamics of open classical systems far from equilibrium. Phys. Rev. E, 104:024121, Aug 2021.
  52. Hadrien Vroylandt. On the derivation of the generalized langevin equation and the fluctuation-dissipation theorem. Europhysics Letters, 140(6):62003, dec 2022.
  53. Roland R. Netz. Derivation of the non-equilibrium generalized langevin equation from a generic time-dependent hamiltonian, 2023. preprint on arXiv:2310.00748.
  54. Non-markovian modeling of non-equilibrium fluctuations and dissipation in active viscoelastic biomatter. arXiv preprint arXiv:2207.11307, 2022.
  55. Robert Zwanzig. Nonequilibrium Statistical Physics. Oxford University Press, 2001.
  56. Hazime Mori. Transport, Collective Motion, and Brownian Motion. Progress of Theoretical Physics, 33(3):423–455, 03 1965.
  57. Robert Zwanzig. Memory effects in irreversible thermodynamics. Phys. Rev., 124:983–992, Nov 1961.
  58. Brownian motion from molecular dynamics. Chemical Physics, 375(2-3):316–326, Oct 2010.
  59. Two algorithms to compute projected correlation functions in molecular dynamics simulations. The Journal of Chemical Physics, 140(12):124103, 2014.
  60. Oscillatory active microrheology of active suspensions. Scientific Reports, 11, 11 2021.
  61. Disordered boundaries destroy bulk phase separation in scalar active matter. Physical Review E, 105(4), apr 2022.
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