Papers
Topics
Authors
Recent
Gemini 2.5 Flash
Gemini 2.5 Flash
129 tokens/sec
GPT-4o
28 tokens/sec
Gemini 2.5 Pro Pro
42 tokens/sec
o3 Pro
4 tokens/sec
GPT-4.1 Pro
38 tokens/sec
DeepSeek R1 via Azure Pro
28 tokens/sec
2000 character limit reached

A Comprehensive Review of Computer-aided Whole-slide Image Analysis: from Datasets to Feature Extraction, Segmentation, Classification, and Detection Approaches (2102.10553v1)

Published 21 Feb 2021 in cs.CV and cs.AI

Abstract: With the development of computer-aided diagnosis (CAD) and image scanning technology, Whole-slide Image (WSI) scanners are widely used in the field of pathological diagnosis. Therefore, WSI analysis has become the key to modern digital pathology. Since 2004, WSI has been used more and more in CAD. Since machine vision methods are usually based on semi-automatic or fully automatic computers, they are highly efficient and labor-saving. The combination of WSI and CAD technologies for segmentation, classification, and detection helps histopathologists obtain more stable and quantitative analysis results, save labor costs and improve diagnosis objectivity. This paper reviews the methods of WSI analysis based on machine learning. Firstly, the development status of WSI and CAD methods are introduced. Secondly, we discuss publicly available WSI datasets and evaluation metrics for segmentation, classification, and detection tasks. Then, the latest development of machine learning in WSI segmentation, classification, and detection are reviewed continuously. Finally, the existing methods are studied, the applicabilities of the analysis methods are analyzed, and the application prospects of the analysis methods in this field are forecasted.

Citations (164)

Summary

  • The paper presents an extensive review of computer-aided whole-slide image analysis, highlighting machine learning integration for segmentation, classification, and detection.
  • It details both traditional and deep learning feature extraction techniques, including CNN-based methods and architectures like U-net.
  • The review emphasizes key datasets and evaluation metrics such as ROC and Dice coefficients, linking methodological trends with enhanced diagnostic accuracy.

Comprehensive Review of Computer-aided Whole-slide Image Analysis

The paper by Chen Li et al. offers an extensive survey of methods used in the analysis of whole-slide images (WSI) in the context of computer-aided diagnosis (CAD). This field is pivotal for advancement in digital pathology, allowing for efficient, automated processing and evaluation of histopathological images. The authors detail the evolution of WSI technologies and the integration of machine learning methods into various aspects of image analysis, highlighting the increasing role of segmentation, classification, and detection methods.

The review commences by delineating the technical aspects of WSI systems, elaborating on the digital conversion of glass slides and the subsequent use in automated analysis. It introduces the fundamental components of WSI systems, including scanning technologies, storage solutions, and analysis software, setting the stage for the ensuing discussion on machine learning applications.

Datasets such as The Cancer Genome Atlas (TCGA) and Camelyon are emphasized as foundational resources driving methodological advancements and facilitating comparative evaluation. The review provides a thorough exploration of key evaluation metrics employed across segmentation, classification, and detection tasks, such as ROC and Dice coefficients, offering insights into the benchmarks governing system performance.

A substantive portion of the paper is devoted to feature extraction, detailing both traditional techniques, such as color and texture analysis, and more recent deep learning approaches utilizing Convolutional Neural Networks (CNN). These techniques underlie the efficacy of segmentation methods, which are categorized into threshold-based, region-based, graph-based, and clustering-based strategies, as well as those employing deep learning frameworks like U-net and FCN.

Classification methods are scrutinized, with SVM and RF algorithms highlighted among traditional techniques, and deep learning methods such as MIL and ensemble learning delineated for their superior performance in recent studies. Similarly, detection methods, essential for identifying pathological regions, are explored with reference to evolving methodologies using deep learning models.

The paper concludes with an analysis of methodological trends, emphasizing the shift toward deep learning and multi-resolution analysis for improving diagnostic accuracy. Chen Li et al. underscore the potential for expanding research into diverse pathological domains beyond well-studied areas like breast and prostate cancer, advocating for comprehensive datasets to fuel ongoing innovation.

Overall, the paper provides a rigorous and comprehensive review essential for researchers in medical imaging and pathology. It identifies key challenges and opportunities for future developments, underscoring the need for scalable, interpretable models capable of integrating diverse data types and optimizing diagnostic workflows. Through thoughtful discourse and detailed categorization, it sets a benchmark for ongoing scholarship in the field of computer-aided WSI analysis.