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Predict then Propagate: Graph Neural Networks meet Personalized PageRank (1810.05997v6)

Published 14 Oct 2018 in cs.LG and stat.ML

Abstract: Neural message passing algorithms for semi-supervised classification on graphs have recently achieved great success. However, for classifying a node these methods only consider nodes that are a few propagation steps away and the size of this utilized neighborhood is hard to extend. In this paper, we use the relationship between graph convolutional networks (GCN) and PageRank to derive an improved propagation scheme based on personalized PageRank. We utilize this propagation procedure to construct a simple model, personalized propagation of neural predictions (PPNP), and its fast approximation, APPNP. Our model's training time is on par or faster and its number of parameters on par or lower than previous models. It leverages a large, adjustable neighborhood for classification and can be easily combined with any neural network. We show that this model outperforms several recently proposed methods for semi-supervised classification in the most thorough study done so far for GCN-like models. Our implementation is available online.

Citations (1,547)

Summary

  • The paper introduces a novel model, PPNP, that decouples feature transformation from propagation using Personalized PageRank.
  • It leverages a teleportation mechanism to balance local and global information, effectively mitigating the oversmoothing issue in traditional GCNs.
  • APPNP offers a computationally efficient approximation that achieves superior classification accuracy on benchmark datasets with fewer training epochs.

Insights into the Intersection of Graph Neural Networks and Personalized PageRank

The paper "Predict then Propagate: Graph Neural Networks meet Personalized PageRank" presents a novel approach to improve semi-supervised classification on graphs by integrating the concept of Personalized PageRank (PPR) with neural message passing algorithms. The authors introduce a model called Personalized Propagation of Neural Predictions (PPNP) and its computationally efficient approximation (APPNP).

Core Contributions and Methodology

The main contribution of the paper lies in addressing the limitations of traditional Graph Convolutional Networks (GCNs) that generally operate over limited neighborhood sizes due to issues like oversmoothing from multiple propagation layers. The authors leverage the relationship between GCNs and the PageRank algorithm to derive a new propagation strategy based on PPR, which maintains a node's local neighborhood relevance even when considering a large range for propagation.

To achieve this, the PPNP model separates the feature transformation from the propagation mechanism. This decoupling allows the model to expand its receptive field considerably without adding complexity or parameters to the neural network itself, reducing the risk of oversmoothing. It integrates a teleportation mechanism—common in PageRank—to balance local and global information, thus allowing infinite propagation steps effectively without the performance degradation seen in regular GCNs.

The APPNP variant further enhances the practicality of PPNP by offering linear computational complexity. It approximates the PPR through power iteration, which significantly reduces computational demands while retaining performance within reasonable approximation bounds.

Experimental Findings

The authors conducted extensive experiments using benchmark datasets such as Citeseer, Cora-ML, PubMed, and MS Academic. They compared the performance of PPNP and APPNP against various state-of-the-art models such as GCNs, GAT, and others. The results demonstrate superior classification accuracy and robustness across different datasets and conditions, notably in scenarios with sparse label propagation, where APPNP showed substantial accuracy improvements.

The experimental protocol emphasized robustness with a meticulous setup, highlighting the sensitivity of message-passing algorithms to data splits and initializations. Such rigor uncovered potential overfitting issues in previous evaluations of competing methods. PPNP and APPNP not only delivered high accuracy but did so with fewer training epochs compared to other complex architectures.

Implications and Future Directions

The integration of Personalized PageRank with neural network predictions paves a path for more scalable and flexible graph neural models. The approach enriches the task of node classification by considering wider contextual information without punitive computational costs. This development might provide a blueprint for further exploration into more generalized frameworks that integrate graph-theoretical concepts with learning paradigms.

Future research could extend the applicability of PPNP and APPNP to other graph-based tasks such as link prediction or clustering. Exploring different neural architectures that complement the PPR-based propagation could uncover additional performance gains. Furthermore, adapting these methods to dynamic or heterogeneous graphs remains an open challenge with significant implications for real-time and multi-modal graph processing tasks.

Overall, the paper provides a significant step forward in graph neural networks by effectively tackling the complexity and range limitations of existing propagation methods, aligning closely with theoretical models like PageRank to enhance practical outcomes in semi-supervised learning.

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