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A Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction (1703.00555v1)

Published 1 Mar 2017 in cs.CV

Abstract: The acquisition of Magnetic Resonance Imaging (MRI) is inherently slow. Inspired by recent advances in deep learning, we propose a framework for reconstructing MR images from undersampled data using a deep cascade of convolutional neural networks to accelerate the data acquisition process. We show that for Cartesian undersampling of 2D cardiac MR images, the proposed method outperforms the state-of-the-art compressed sensing approaches, such as dictionary learning-based MRI (DLMRI) reconstruction, in terms of reconstruction error, perceptual quality and reconstruction speed for both 3-fold and 6-fold undersampling. Compared to DLMRI, the error produced by the method proposed is approximately twice as small, allowing to preserve anatomical structures more faithfully. Using our method, each image can be reconstructed in 23 ms, which is fast enough to enable real-time applications.

A Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction: A Review

The discussed paper presents a novel framework for reconstructing Magnetic Resonance Imaging (MRI) data using a deep cascade of Convolutional Neural Networks (CNNs). This method addresses the intrinsic slowness of MRI data acquisition by under-sampling in the spatial frequency domain, known as kk-space, and subsequently reconstructing full images through computational techniques. The authors demonstrate that their approach outperforms existing state-of-the-art methods, particularly dictionary learning-based MRI (DLMRI) reconstruction, in terms of both reconstruction quality and computational efficiency.

Methodology and Results

The proposed framework employs a series of CNNs structured in a cascading manner, with each CNN layer performing a sophisticated de-aliasing operation on the undersampled MR data. This architecture mimics the iterative nature of traditional optimization algorithms used in compressed sensing (CS) approaches. The cascading CNN utilizes data consistency layers to incorporate kk-space data fidelity directly into the training process, ensuring that the network output remains faithful to the original undersampled data.

Quantitatively, the approach achieves significant reductions in mean squared error (MSE) compared to DLMRI. For instance, on 3-fold and 6-fold undersampling of 2D cardiac MRI data, the proposed method delivers MSE values of 0.89 x 10<sup>-3</sup> and 3.42 x 10<sup>-3</sup>, respectively, compared to DLMRI's 2.12 x 10<sup>-3</sup> and 6.31 x 10<sup>-3</sup>. These results highlight the CNN's efficacy in preserving anatomical structures with greater fidelity. Notably, the CNN approach supports real-time applications, reconstructing each MR image in merely 23 milliseconds, a stark contrast to the several hours required by DLMRI.

Implications and Future Directions

The implications of utilizing CNNs in MR image reconstruction are profound, allowing for faster acquisition processes that can alleviate strain on patients and reduce costs associated with MRI. The paradigm shift from sparse coding approaches to deep learning models harnesses data-driven feature extraction capabilities, which can potentially lead to more robust and adaptable image reconstruction algorithms.

Theoretically, the success of CNNs in this domain challenges the traditional reliance on explicit mathematical assumptions inherent in CS methodologies, such as sparse representation. The ability of CNNs to learn complex transformations suggests that deep learning models could potentially generalize to other types of undersampling patterns beyond Cartesian, such as radial or spiral trajectories.

Future research could focus on integrating parallel imaging techniques and exploring CNN architectures that can leverage coil sensitivity maps, which would further exploit data redundancy inherent in MR data and parallel imaging. Additionally, investigating how these models perform with diverse anatomical anomalies or pathologies would be critical in assessing their utility in broader clinical applications.

In summary, the use of deep cascading CNNs for MR image reconstruction represents a significant advancement, combining speed and accuracy in a manner that addresses long-standing limitations in MRI technology. The approach's success paves the way for further integration of AI and deep learning techniques in medical imaging and diagnostic applications.

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Authors (5)
  1. Jo Schlemper (27 papers)
  2. Jose Caballero (16 papers)
  3. Joseph V. Hajnal (33 papers)
  4. Anthony Price (5 papers)
  5. Daniel Rueckert (335 papers)
Citations (337)