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A Fully Convolutional Neural Network based Structured Prediction Approach Towards the Retinal Vessel Segmentation (1611.02064v2)

Published 7 Nov 2016 in cs.CV

Abstract: Automatic segmentation of retinal blood vessels from fundus images plays an important role in the computer aided diagnosis of retinal diseases. The task of blood vessel segmentation is challenging due to the extreme variations in morphology of the vessels against noisy background. In this paper, we formulate the segmentation task as a multi-label inference task and utilize the implicit advantages of the combination of convolutional neural networks and structured prediction. Our proposed convolutional neural network based model achieves strong performance and significantly outperforms the state-of-the-art for automatic retinal blood vessel segmentation on DRIVE dataset with 95.33% accuracy and 0.974 AUC score.

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Authors (2)
  1. Avijit Dasgupta (4 papers)
  2. Sonam Singh (3 papers)
Citations (220)

Summary

A Fully Convolutional Neural Network based Structured Prediction Approach towards the Retinal Vessel Segmentation

The paper presents a significant contribution to the field of retinal image analysis by introducing a fully convolutional neural network (CNN) architecture specifically designed for retinal vessel segmentation. The researchers approached the problem of blood vessel segmentation as a multi-label inference task, utilizing the compelling synergy between convolutional neural networks and structured prediction techniques. The focus on automatic segmentation of retinal blood vessels from fundus images is driven by the critical role such segmentation plays in diagnosing ophthalmological diseases such as diabetes and hypertension.

Methodology and Architecture

The proposed methodology involves preprocessing the fundus images by extracting the green channel, which provides high contrast for blood vessels. This preprocessing is followed by contrast limited adaptive histogram equalization and normalization, enhancing the segmentation potential.

The CNN architecture introduced in the paper is noteworthy for its focus on structured prediction. It consists of multiple layers: convolutional layers interspersed with pooling and upsampling layers, employing ReLU activations, and a final layer using softmax. The architecture emphasizes hierarchical feature learning, which is paramount for accurate segmentation. The key since is optimizing using a cross-entropy loss function adapted for multi-label learning, allowing the network to predict on a per-pixel basis, accommodating spatial dependencies crucial for anatomical segmentation tasks.

Experimental Results

A comprehensive evaluation of the proposed model was conducted on the DRIVE dataset, a benchmark for retinal image analysis. The model achieved impressive results with an accuracy of 95.33% and an AUC score of 0.974, outperforming numerous state-of-the-art techniques. Notably, the paper includes a detailed comparison of performance metrics such as precision, sensitivity, and specificity, underscoring the model's robustness and efficacy in handling the variability and complexity of retinal blood vessels.

Discussion and Implications

The results substantiate the viability of using fully CNNs for medical imaging tasks, especially where precise segmentation is essential. The inclusion of structured prediction enables capturing interactions among neighboring pixels, elevating the segmentation quality. The achievement of state-of-the-art performance underscores the model's capacity to generalize well, offering robust solutions for tasks hampered by noise and anatomical variability. The authors’ exploration into task-specific feature representation without relying on domain-specific handcrafted features points to a broader applicability in medical imaging fields, where manual feature crafting is prohibitively time-consuming and potentially less effective.

Future Directions

The success of the proposed architecture indicates potential for further exploration into multi-scale features within CNNs, as well as advanced forms of regularization to enhance generalizability across different datasets. Additionally, further investigation into unsupervised or semi-supervised learning paradigms might be beneficial, particularly in medical contexts where labeled data is limited. The structured prediction approach can be extended to other anatomical segmentation tasks, potentially leading to improved diagnostic support tools across various medical imaging disciplines.

In conclusion, this paper represents a resonant advance in the application of fully CNNs for automated medical image analysis, specifically in the retinal domain. The combination of innovative architectural strategies and rigorous validation situates this work as a pivotal reference point for future research and application in automated retinal diagnostics.