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Exact enumeration of cherries and pitchforks in ranked trees under the coalescent model (1112.1295v3)

Published 6 Dec 2011 in math.CO, cs.DM, and q-bio.PE

Abstract: We consider exact enumerations and probabilistic properties of ranked trees when generated under the random coalescent process. Using a new approach, based on generating functions, we derive several statistics such as the exact probability of finding k cherries in a ranked tree of fixed size n. We then extend our method to consider also the number of pitchforks. We find a recursive formula to calculate the joint and conditional probabilities of cherries and pitch- forks when the size of the tree is fixed.

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