Bridging-induced Aggregation in Neutral Polymers: Dynamics and Morphologies (2504.00703v1)

Abstract: Using molecular dynamics simulations, we investigate the aggregation behavior of neutral stiff (rod-like) and flexible polymer chains mediated by attractive crowders. Attractive crowders serve as bridging agents, inducing aggregation through effective intra-polymer attractions. The critical monomer-crowder attraction strength ($\epsilon_{mc}^*$) required for aggregation differs notably between rigid rods and flexible polymers. Interestingly, this aggregation threshold closely matches the critical attraction required for the extended-to-collapsed (coil-globule) transition of a single flexible polymer chain, suggesting a fundamental connection between single-chain collapse and multi-chain aggregation. Furthermore, we demonstrate that $\epsilon_{mc}^*$ decreases with increasing system density and larger crowder sizes, highlighting the synergistic roles of crowding effects and crowder dimensions. Aggregate morphologies exhibit strong dependence on polymer flexibility: rigid rods predominantly form elongated cylindrical bundles, whereas flexible polymers aggregate into compact spherical clusters. These findings provide comprehensive insights into how bridging interactions driven by attractive crowders regulate polymer aggregation dynamics and morphologies, emphasizing the importance of polymer rigidity, crowder size, and system density.