EAR: Edge-Aware Reconstruction of 3-D vertebrae structures from bi-planar X-ray images (2407.20937v2)
Abstract: X-ray images ease the diagnosis and treatment process due to their rapid imaging speed and high resolution. However, due to the projection process of X-ray imaging, much spatial information has been lost. To accurately provide efficient spinal morphological and structural information, reconstructing the 3-D structures of the spine from the 2-D X-ray images is essential. It is challenging for current reconstruction methods to preserve the edge information and local shapes of the asymmetrical vertebrae structures. In this study, we propose a new Edge-Aware Reconstruction network (EAR) to focus on the performance improvement of the edge information and vertebrae shapes. In our network, by using the auto-encoder architecture as the backbone, the edge attention module and frequency enhancement module are proposed to strengthen the perception of the edge reconstruction. Meanwhile, we also combine four loss terms, including reconstruction loss, edge loss, frequency loss and projection loss. The proposed method is evaluated using three publicly accessible datasets and compared with four state-of-the-art models. The proposed method is superior to other methods and achieves 25.32%, 15.32%, 86.44%, 80.13%, 23.7612 and 0.3014 with regard to MSE, MAE, Dice, SSIM, PSNR and frequency distance. Due to the end-to-end and accurate reconstruction process, EAR can provide sufficient 3-D spatial information and precise preoperative surgical planning guidance.
- Medical image classification using spatial adjacent histogram based on adaptive local binary patterns, Comput. Bio. Med. 72 (2016) 185–200.
- Efficient image decolorization with a multimodal contrast-preserving measure, Comput. Graph. 70 (2018) 251–260.
- 3d reconstruction method from biplanar radiography using non-stereocorresponding points and elastic deformable meshes, Med. Bio. Eng. Comput. 38 (2000) 133–139.
- 3d reconstruction of the spine from biplanar x-rays using parametric models based on transversal and longitudinal inferences, Med. Eng. Phys. 31 (2009) 681–687.
- Scaled, patient-specific 3d vertebral model reconstruction based on 2d lateral fluoroscopy, Int. J. Comput. Assist. Radiol. Surg. 6 (2011) 351–366.
- Articulated spine models for 3-d reconstruction from partial radiographic data, IEEE Tran. Biomed. Eng. 55 (2008) 2565–2574.
- 3d/2d registration and segmentation of scoliotic vertebrae using statistical models, Computerized Med. Imaging Graph. 27 (2003) 321–337.
- A hierarchical statistical modeling approach for the unsupervised 3-d biplanar reconstruction of the scoliotic spine, IEEE Tran. Biomed. Eng. 52 (2005) 2041–2057.
- Patient-specific reconstruction of volumetric computed tomography images from a single projection view via deep learning, Nat. Biomed. Eng. 3 (2019) 880--888.
- X2ct-gan: Reconstructing ct from biplanar x-rays with generative adversarial networks, in: 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), IEEE, Long Beach, CA, USA, 2019, pp. 10611--10620.
- X-ctrsnet: 3d cervical vertebra ct reconstruction and segmentation directly from 2d x-ray images, Knowl. Based Syst. 236 (2022) 107680.
- End-to-end convolutional neural network for 3d reconstruction of knee bones from bi-planar x-ray images, in: Machine Learning for Medical Image Reconstruction: Third International Workshop, MLMIR 2020, Held in Conjunction with MICCAI 2020, Lima, Peru, October 8, 2020, Proceedings 3, Springer, 2020, pp. 123--133.
- Ccx-raynet: A class conditioned convolutional neural network for biplanar x-rays to ct volume, in: 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), IEEE, Nice, France, 2021, pp. 1655--1659.
- Reconstruction of 3d ct from a single x-ray projection view using cvae-gan, in: 2021 IEEE International Conference on Medical Imaging Physics and Engineering (ICMIPE), IEEE, Hefei, China, 2021, pp. 1--6.
- Bx2s-net:learning to reconstruct 3d spinal structures from bi-planar x-ray images, Comput. Bio. Med. 154 (2023) 106615.
- Mate3d: Mask-guided text-based 3d-aware portrait editing, arXiv preprint arXiv:2312.06947 (2023).
- 3d reconstruction of leg bones from x-ray images using cnn-based feature analysis, in: 2019 International Conference on Information and Communication Technology Convergence (ICTC), IEEE, Jeju Island, Korea (South), 2019, pp. 669--672.
- Et-net: A generic edge-attention guidance network for medical image segmentation, in: Medical Image Computing and Computer Assisted Intervention--MICCAI 2019: 22nd International Conference, Shenzhen, China, October 13--17, 2019, Proceedings, Part I 22, Springer, 2019, pp. 442--450.
- Inf-net: Automatic covid-19 lung infection segmentation from ct images, IEEE Trans. Med. Imaging 39 (2020) 2626--2637.
- Duda-net: a double u-shaped dilated attention network for automatic infection area segmentation in covid-19 lung ct images, Int. J. Comput. Assist. Radiol. Surg. 16 (2021) 1425--1434.
- Eanet: Iterative edge attention network for medical image segmentation, Pattern Recognit. 127 (2022) 108636.
- 3d vessel-like structure segmentation in medical images by an edge-reinforced network, Med. Image Anal. 82 (2022) 102581.
- Pairwise attention-enhanced adversarial model for automatic bone segmentation in ct images, Phys. Med. Bio. 68 (2023) 035019.
- Unsupervised domain adaptation via style adaptation and boundary enhancement for medical semantic segmentation, Neurocomputing 550 (2023) 126469.
- Free-form image inpainting with gated convolution, in: Proceedings of the IEEE/CVF international conference on computer vision, 2019, pp. 4471--4480.
- Ldanet: Automatic lung parenchyma segmentation from ct images, Comput. Bio. Med. 155 (2023) 106659.
- Deepdrr -- a catalyst for machine learning in fluoroscopy-guided procedures, in: Medical Image Computing and Computer-Assisted Intervention--MICCAI 2018: 16th International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part IV 11, 2018, pp. 98--106.
- In silico simulation: a key enabling technology for next-generation intelligent surgical systems, Prog. Biomed. Eng. 5 (2023) 032001.
- A vertebral segmentation dataset with fracture grading, Radiol. Artif. Intell. 2 (2020) e190138.
- A computed tomography vertebral segmentation dataset with anatomical variations and multi-vendor scanner data, Sci. Data 8 (2021) 284.
- Verse: A vertebrae labelling and segmentation benchmark for multi-detector ct images, Med. image anal. 73 (2021) 102166.
- Vertebrae localization in pathological spine ct via dense classification from sparse annotations, in: Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II 16, Springer, 2013, pp. 262--270.
- Z. Zhou, S. Tulsiani, Sparsefusion: Distilling view-conditioned diffusion for 3d reconstruction, in: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2023, pp. 12588--12597.
- Instant neural graphics primitives with a multiresolution hash encoding, ACM transactions on graphics (TOG) 41 (2022) 1--15.
- 3d gaussian splatting for real-time radiance field rendering, ACM Trans. Graph. 42 (2023) 1--14.
- Parallel and efficient approximate nearest patch matching for image editing applications, Neurocomputing 305 (2018) 39--50.