Papers
Topics
Authors
Recent
Gemini 2.5 Flash
Gemini 2.5 Flash
156 tokens/sec
GPT-4o
7 tokens/sec
Gemini 2.5 Pro Pro
45 tokens/sec
o3 Pro
4 tokens/sec
GPT-4.1 Pro
38 tokens/sec
DeepSeek R1 via Azure Pro
28 tokens/sec
2000 character limit reached

Near-Isotropic Sub-Ångstrom 3D Resolution Phase Contrast Imaging Achieved by End-to-End Ptychographic Electron Tomography (2407.19407v1)

Published 28 Jul 2024 in physics.comp-ph, cond-mat.mtrl-sci, cs.LG, and math.OC

Abstract: Three-dimensional atomic resolution imaging using transmission electron microscopes is a unique capability that requires challenging experiments. Linear electron tomography methods are limited by the missing wedge effect, requiring a high tilt range. Multislice ptychography can achieve deep sub-{\AA}ngstrom resolution in the transverse direction, but the depth resolution is limited to 2 to 3 nanometers. In this paper, we propose and demonstrate an end-to-end approach to reconstructing the electrostatic potential volume of the sample directly from the 4D-STEM datasets. End-to-end multi-slice ptychographic tomography recovers several slices at each tomography tilt angle and compensates for the missing wedge effect. The algorithm is initially tested in simulation with a Pt@$\mathrm{Al_2O_3}$ core-shell nanoparticle, where both heavy and light atoms are recovered in 3D from an unaligned 4D-STEM tilt series with a restricted tilt range of 90 degrees. We also demonstrate the algorithm experimentally, recovering a Te nanoparticle with sub-{\AA}ngstrom resolution.

Summary

  • The paper introduces an end-to-end ptychographic electron tomography method that achieves near-isotropic sub-Ångstrom 3D resolution despite the missing wedge effect.
  • It details a multi-slice forward model with probe correction and alignment that accurately reconstructs both heavy and light atomic structures from limited tilt series.
  • Experimental validation on Te nanoparticles demonstrates reduced electron dose imaging and high-resolution recovery, advancing applications in materials and biological studies.

An Overview of End-to-End Ptychographic Electron Tomography for Near-Isotropic Sub-Ångstrom 3D Resolution Imaging

This paper introduces an advanced technique in the field of electron tomography, leveraging an end-to-end ptychographic approach to achieve near-isotropic sub-Ångstrom 3D resolution. The methodology presented is a significant stride in overcoming the inherent limitations of traditional linear electron tomography, notably the missing wedge effect, and achieving a breakthrough in 3D imaging capabilities with transmission electron microscopes (TEM).

Core Contributions and Methodology

The paper delineates a comprehensive computational approach to recovering the electrostatic potential volume of a sample using 4D Scanning Transmission Electron Microscopy (4D-STEM) datasets. This is primarily executed through an enhanced algorithm that integrates multi-slice ptychographic tomography. The algorithm adeptly reconstructs multiple slices sequentially at each tomography tilt angle, thereby significantly compensating for the missing wedge effect, a prominent challenge in 3D imaging using TEM.

Key to this approach is the integration of a multi-slice forward model, partial coherence modeling, probe positioning correction, and the simultaneous alignment of tomographic parameters. The authors initiate their method by testing simulations with Pt@Al₂O₃ core-shell nanoparticle models and extend it to experimental validation with actual specimens like Te nanoparticles. Their simulations showcase the successful recovery of both heavy and light atoms in a 3D structure from a limited tilt series.

Numerical Results and Experimental Verification

The authors report that their algorithm retrieves atomic-level details effectively, even with a restricted tilt range of 90 degrees. Remarkably, through the joint tomographic and alignment approach, they demonstrate precise atomic location retrieval in simulations. Furthermore, they achieve experimental reconstruction of a Te nanoparticle at sub-Ångstrom resolution, underscoring the algorithm's capability to handle real-world electron microscopy challenges effectively.

Additionally, the research highlights a significant advancement in minimizing the required electron dose without compromising on structural resolution, an essential factor for imaging beam-sensitive materials. The results indicate that the proposed method can achieve sub-Ångstrom resolution with reduced electron dose, facilitating broader applications, particularly in biologically sensitive samples.

Implications and Future Directions

The implications of this research are multifaceted, encompassing both practical enhancements and theoretical advancements in the domain of electron microscopy. The ability to compensate for the missing wedge effect without additional hardware modifications presents a streamlined, efficient method for high-resolution 3D imaging. This capability could revolutionize materials science, nanotechnology, and biological imaging, where intricate 3D structural details are pivotal.

The potential for this method to be applied to a wide array of samples, including beam-sensitive materials, paves the way for more profound explorations in materials research. Future developments could focus on further optimizing the multi-slice ptychography approach, enhancing computational efficiency, and extending the methodology to capture even more detailed and larger-scale 3D reconstructions.

The authors provide a robust framework for future exploration into electron tomography, particularly in achieving isotropic resolutions in conditions previously limited by computational and experimental constraints. The paper establishes a solid foundation for subsequent innovations in combined ptychographic and tomographic methodologies, offering significant potential for breakthroughs in 3D atomic-scale imaging.

Youtube Logo Streamline Icon: https://streamlinehq.com