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Simultaneous q-Space Sampling Optimization and Reconstruction for Fast and High-fidelity Diffusion Magnetic Resonance Imaging (2401.01662v1)

Published 3 Jan 2024 in cs.CV

Abstract: Diffusion Magnetic Resonance Imaging (dMRI) plays a crucial role in the noninvasive investigation of tissue microstructural properties and structural connectivity in the \textit{in vivo} human brain. However, to effectively capture the intricate characteristics of water diffusion at various directions and scales, it is important to employ comprehensive q-space sampling. Unfortunately, this requirement leads to long scan times, limiting the clinical applicability of dMRI. To address this challenge, we propose SSOR, a Simultaneous q-Space sampling Optimization and Reconstruction framework. We jointly optimize a subset of q-space samples using a continuous representation of spherical harmonic functions and a reconstruction network. Additionally, we integrate the unique properties of diffusion magnetic resonance imaging (dMRI) in both the q-space and image domains by applying $l1$-norm and total-variation regularization. The experiments conducted on HCP data demonstrate that SSOR has promising strengths both quantitatively and qualitatively and exhibits robustness to noise.

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References (22)
  1. “A microstructure estimation transformer inspired by sparse representation for diffusion mri,” Medical Image Analysis, vol. 86, pp. 102788, 2023.
  2. “Diffusion magnetic resonance imaging: its principle and applications,” The Anatomical Record: An Official Publication of the American Association of Anatomists, vol. 257, no. 3, pp. 102–109, 1999.
  3. “Diffusion-weighted mr imaging of the liver,” Radiology, vol. 254, no. 1, pp. 47–66, 2010.
  4. “Quantitative diffusion-weighted mr imaging in the differential diagnosis of breast lesion,” European radiology, vol. 17, pp. 2646–2655, 2007.
  5. “Correlation of perfusion-and diffusion-weighted mri with nihss score in acute (¡ 6.5 hour) ischemic stroke,” Neurology, vol. 50, no. 4, pp. 864–869, 1998.
  6. “Mr diffusion tensor imaging study of postinfarct myocardium structural remodeling in a porcine model,” Magnetic Resonance in Medicine: An Official Journal of the International Society for Magnetic Resonance in Medicine, vol. 58, no. 4, pp. 687–695, 2007.
  7. “Angular upsampling in infant diffusion mri using neighborhood matching in x-q space,” Frontiers in Neuroinformatics, vol. 12, pp. 57, 2018.
  8. “Q-space deep learning: twelve-fold shorter and model-free diffusion mri scans,” IEEE Transactions on Medical Imaging, vol. 35, no. 5, pp. 1344–1351, 2016.
  9. “Fast and accurate reconstruction of hardi using a 1d encoder-decoder convolutional network,” arXiv preprint arXiv:1903.09272, 2019.
  10. “Deep learning for fast mr imaging: a review for learning reconstruction from incomplete k-space data,” Biomedical Signal Processing and Control, vol. 68, pp. 102579, 2021.
  11. “Scalable learning-based sampling optimization for compressive dynamic mri,” in ICASSP 2020-2020 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). IEEE, 2020, pp. 8584–8588.
  12. “Towards learned optimal q-space sampling in diffusion mri,” in Computational Diffusion MRI: International MICCAI Workshop, Lima, Peru, October 2020. Springer, 2021, pp. 13–28.
  13. “Multi-shell d-mri reconstruction via residual learning utilizing encoder-decoder network with attention (msr-net),” in 2020 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC). IEEE, 2020, pp. 1709–1713.
  14. “Regularized, fast, and robust analytical q-ball imaging,” Magnetic Resonance in Medicine: An Official Journal of the International Society for Magnetic Resonance in Medicine, vol. 58, no. 3, pp. 497–510, 2007.
  15. “U-net: Convolutional networks for biomedical image segmentation,” in Medical Image Computing and Computer-Assisted Intervention–MICCAI 2015: 18th International Conference, Munich, Germany, October 5-9, 2015, Proceedings, Part III 18. Springer, 2015, pp. 234–241.
  16. Chuyang Ye, “Estimation of tissue microstructure using a deep network inspired by a sparse reconstruction framework,” in Information Processing in Medical Imaging: 25th International Conference, IPMI 2017, Boone, NC, USA, June 25-30, 2017, Proceedings 25. Springer, 2017, pp. 466–477.
  17. “An improved deep network for tissue microstructure estimation with uncertainty quantification,” Medical image analysis, vol. 61, pp. 101650, 2020.
  18. “A joint compressed-sensing and super-resolution approach for very high-resolution diffusion imaging,” NeuroImage, vol. 125, pp. 386–400, 2016.
  19. “Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging,” Magnetic Resonance in Medicine: An Official Journal of the International Society for Magnetic Resonance in Medicine, vol. 42, no. 3, pp. 515–525, 1999.
  20. “The wu-minn human connectome project: an overview,” Neuroimage, vol. 80, pp. 62–79, 2013.
  21. “Design of multishell sampling schemes with uniform coverage in diffusion mri,” Magnetic resonance in medicine, vol. 69, no. 6, pp. 1534–1540, 2013.
  22. “Adam: A method for stochastic optimization,” arXiv preprint arXiv:1412.6980, 2014.
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Authors (7)
  1. Jing Yang (320 papers)
  2. Jian Cheng (127 papers)
  3. Cheng Li (1094 papers)
  4. Wenxin Fan (14 papers)
  5. Juan Zou (20 papers)
  6. Ruoyou Wu (15 papers)
  7. Shanshan Wang (166 papers)

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