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BRAIxDet: Learning to Detect Malignant Breast Lesion with Incomplete Annotations (2301.13418v4)

Published 31 Jan 2023 in cs.CV, cs.AI, and cs.LG

Abstract: Methods to detect malignant lesions from screening mammograms are usually trained with fully annotated datasets, where images are labelled with the localisation and classification of cancerous lesions. However, real-world screening mammogram datasets commonly have a subset that is fully annotated and another subset that is weakly annotated with just the global classification (i.e., without lesion localisation). Given the large size of such datasets, researchers usually face a dilemma with the weakly annotated subset: to not use it or to fully annotate it. The first option will reduce detection accuracy because it does not use the whole dataset, and the second option is too expensive given that the annotation needs to be done by expert radiologists. In this paper, we propose a middle-ground solution for the dilemma, which is to formulate the training as a weakly- and semi-supervised learning problem that we refer to as malignant breast lesion detection with incomplete annotations. To address this problem, our new method comprises two stages, namely: 1) pre-training a multi-view mammogram classifier with weak supervision from the whole dataset, and 2) extending the trained classifier to become a multi-view detector that is trained with semi-supervised student-teacher learning, where the training set contains fully and weakly-annotated mammograms. We provide extensive detection results on two real-world screening mammogram datasets containing incomplete annotations, and show that our proposed approach achieves state-of-the-art results in the detection of malignant breast lesions with incomplete annotations.

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References (62)
  1. Deep learning for mass detection in full field digital mammograms. Computers in biology and medicine 121, 103774.
  2. Chest pathology detection using deep learning with non-medical training, in: 2015 IEEE 12th international symposium on biomedical imaging (ISBI), IEEE. pp. 294–297.
  3. Improvement in sensitivity of screening mammography with computer-aided detection: a multiinstitutional trial. American Journal of Roentgenology 181, 687–693.
  4. In defense of kalman filtering for polyp tracking from colonoscopy videos, in: 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI), IEEE. pp. 1–5.
  5. Exponential moving average normalization for self-supervised and semi-supervised learning, in: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 194–203.
  6. End-to-end object detection with transformers, in: European conference on computer vision, Springer. pp. 213–229.
  7. Automated analysis of unregistered multi-view mammograms with deep learning. IEEE transactions on medical imaging 36, 2355–2365.
  8. This looks like that: deep learning for interpretable image recognition. Advances in neural information processing systems 32.
  9. Multi-view local co-occurrence and global consistency learning improve mammogram classification generalisation, in: International Conference on Medical Image Computing and Computer-Assisted Intervention.
  10. Deep learning pre-training strategy for mammogram image classification: an evaluation study. Journal of Digital Imaging 33, 1257–1265.
  11. Automated mass detection in mammograms using cascaded deep learning and random forests, in: 2015 international conference on digital image computing: techniques and applications (DICTA), IEEE. pp. 1–8.
  12. A deep learning approach for the analysis of masses in mammograms with minimal user intervention. Medical image analysis 37, 114–128.
  13. Effectiveness of computer-aided detection in community mammography practice. Journal of the National Cancer institute 103, 1152–1161.
  14. Influence of computer-aided detection on performance of screening mammography. New England Journal of Medicine 356, 1399–1409.
  15. Admani: Annotated digital mammograms and associated non-image datasets. Radiology: Artificial Intelligence 5, e220072.
  16. Fast r-cnn, in: Proceedings of the IEEE international conference on computer vision, pp. 1440–1448.
  17. Advances in cad for diagnosis of breast cancer. Current opinion in obstetrics & gynecology 18, 64.
  18. Deep residual learning for image recognition, in: Proceedings of the IEEE conference on computer vision and pattern recognition, pp. 770–778.
  19. Relation networks for object detection, in: Proceedings of the IEEE conference on computer vision and pattern recognition, pp. 3588–3597.
  20. Use of normal tissue context in computer-aided detection of masses in mammograms. IEEE Transactions on Medical Imaging 28, 2033–2041.
  21. Standalone computer-aided detection compared to radiologists’ performance for the detection of mammographic masses. European radiology 23, 93–100.
  22. Consistency-based semi-supervised learning for object detection. Advances in neural information processing systems 32.
  23. Adam: A method for stochastic optimization. arXiv preprint arXiv:1412.6980 .
  24. Temporal ensembling for semi-supervised learning. arXiv preprint arXiv:1610.02242 .
  25. Breast-cancer screening—viewpoint of the iarc working group. New England journal of medicine 372, 2353–2358.
  26. Deep learning. nature 521, 436–444.
  27. A curated mammography data set for use in computer-aided detection and diagnosis research. Scientific data 4, 1–9.
  28. Diagnostic accuracy of digital screening mammography with and without computer-aided detection. JAMA internal medicine 175, 1828–1837.
  29. Shape and margin-aware lung nodule classification in low-dose ct images via soft activation mapping. Medical image analysis 60, 101628.
  30. Focal loss for dense object detection, in: Proceedings of the IEEE international conference on computer vision, pp. 2980–2988.
  31. Deep learning for generic object detection: A survey. International journal of computer vision 128, 261–318.
  32. Perturbed and strict mean teachers for semi-supervised semantic segmentation, in: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 4258–4267.
  33. Cross-view correspondence reasoning based on bipartite graph convolutional network for mammogram mass detection, in: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 3812–3822.
  34. From unilateral to bilateral learning: Detecting mammogram masses with contrasted bilateral network, in: Medical Image Computing and Computer Assisted Intervention–MICCAI 2019: 22nd International Conference, Shenzhen, China, October 13–17, 2019, Proceedings, Part VI 22, Springer. pp. 477–485.
  35. Unbiased teacher for semi-supervised object detection. arXiv preprint arXiv:2102.09480 .
  36. Cross-view relation networks for mammogram mass detection, in: 2020 25th International Conference on Pattern Recognition (ICPR), IEEE. pp. 8632–8638.
  37. Is object localization for free?-weakly-supervised learning with convolutional neural networks, in: Proceedings of the IEEE conference on computer vision and pattern recognition, pp. 685–694.
  38. Pytorch: An imperative style, high-performance deep learning library. Advances in neural information processing systems 32, 8026–8037.
  39. Transfusion: Understanding transfer learning for medical imaging. Advances in neural information processing systems 32.
  40. Chexnet: Radiologist-level pneumonia detection on chest x-rays with deep learning. arXiv preprint arXiv:1711.05225 .
  41. You only look once: Unified, real-time object detection, in: Proceedings of the IEEE conference on computer vision and pattern recognition, pp. 779–788.
  42. Faster r-cnn: Towards real-time object detection with region proposal networks. Advances in neural information processing systems 28.
  43. Detecting and classifying lesions in mammograms with deep learning. Scientific reports 8, 1–7.
  44. Imagenet large scale visual recognition challenge. International journal of computer vision 115, 211–252.
  45. Self-guided multiple instance learning for weakly supervised disease classification and localization in chest radiographs, in: Asian Conference on Computer Vision, Springer. pp. 617–634.
  46. Grad-cam: Visual explanations from deep networks via gradient-based localization, in: Proceedings of the IEEE international conference on computer vision, pp. 618–626.
  47. Breast diseases: imaging and clinical management. Springer.
  48. Deep learning to improve breast cancer detection on screening mammography. Scientific reports 9, 1–12.
  49. Globally-aware multiple instance classifier for breast cancer screening, in: International Workshop on Machine Learning in Medical Imaging, Springer. pp. 18–26.
  50. An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization. Medical image analysis 68, 101908.
  51. Cbis-ddsm. https://wiki.cancerimagingarchive.net/display/Public/CBIS-DDSM. [Online; accessed 21-August-2021].
  52. A simple semi-supervised learning framework for object detection. arXiv preprint arXiv:2005.04757 .
  53. Global cancer statistics 2020: Globocan estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA: a cancer journal for clinicians 71, 209–249.
  54. Efficientnet: Rethinking model scaling for convolutional neural networks, in: International Conference on Machine Learning, PMLR. pp. 6105–6114.
  55. Mean teachers are better role models: Weight-averaged consistency targets improve semi-supervised deep learning results. Advances in neural information processing systems 30.
  56. An improved mammography malignancy model with self-supervised learning, in: Medical Imaging 2021: Computer-Aided Diagnosis, SPIE. pp. 210–216.
  57. Chestx-ray8: Hospital-scale chest x-ray database and benchmarks on weakly-supervised classification and localization of common thorax diseases, in: Proceedings of the IEEE conference on computer vision and pattern recognition, pp. 2097–2106.
  58. End-to-end semi-supervised object detection with soft teacher, in: Proceedings of the IEEE/CVF International Conference on Computer Vision, pp. 3060–3069.
  59. Momminet: Mammographic multi-view mass identification networks, in: International Conference on Medical Image Computing and Computer-Assisted Intervention.
  60. Momminet-v2: Mammographic multi-view mass identification networks. Medical Image Analysis , 102204.
  61. Weakly supervised medical diagnosis and localization from multiple resolutions. arXiv preprint arXiv:1803.07703 .
  62. Learning deep features for discriminative localization, in: Proceedings of the IEEE conference on computer vision and pattern recognition, pp. 2921–2929.
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Authors (11)
  1. Yuanhong Chen (30 papers)
  2. Yuyuan Liu (26 papers)
  3. Chong Wang (308 papers)
  4. Michael Elliott (6 papers)
  5. Chun Fung Kwok (1 paper)
  6. Carlos Pena-Solorzano (1 paper)
  7. Yu Tian (249 papers)
  8. Fengbei Liu (24 papers)
  9. Helen Frazer (7 papers)
  10. Davis J. McCarthy (6 papers)
  11. Gustavo Carneiro (129 papers)
Citations (2)

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