Papers
Topics
Authors
Recent
Gemini 2.5 Flash
Gemini 2.5 Flash
102 tokens/sec
GPT-4o
59 tokens/sec
Gemini 2.5 Pro Pro
43 tokens/sec
o3 Pro
6 tokens/sec
GPT-4.1 Pro
50 tokens/sec
DeepSeek R1 via Azure Pro
28 tokens/sec
2000 character limit reached

Scalable Graph Neural Networks for Heterogeneous Graphs (2011.09679v1)

Published 19 Nov 2020 in cs.LG

Abstract: Graph neural networks (GNNs) are a popular class of parametric model for learning over graph-structured data. Recent work has argued that GNNs primarily use the graph for feature smoothing, and have shown competitive results on benchmark tasks by simply operating on graph-smoothed node features, rather than using end-to-end learned feature hierarchies that are challenging to scale to large graphs. In this work, we ask whether these results can be extended to heterogeneous graphs, which encode multiple types of relationship between different entities. We propose Neighbor Averaging over Relation Subgraphs (NARS), which trains a classifier on neighbor-averaged features for randomly-sampled subgraphs of the "metagraph" of relations. We describe optimizations to allow these sets of node features to be computed in a memory-efficient way, both at training and inference time. NARS achieves a new state of the art accuracy on several benchmark datasets, outperforming more expensive GNN-based methods

User Edit Pencil Streamline Icon: https://streamlinehq.com
Authors (4)
  1. Lingfan Yu (4 papers)
  2. Jiajun Shen (35 papers)
  3. Jinyang Li (67 papers)
  4. Adam Lerer (30 papers)
Citations (44)

Summary

Introduction to Graph Neural Networks

Graph neural networks (GNNs) have gained popularity due to their inherent ability to capture complex relationships within graph-structured data. Traditional GNNs engage with graph data through learned aggregation and transformation steps, reflecting the idea that GNNs exploit the provided graph structure to produce predictive features for tasks like classification.

Understanding Neighbor Averaging for Graphs

Recent studies suggest that the effectiveness of GNNs might lie in their capacity to smooth node features across graph neighborhoods rather than constructing complex feature hierarchies. This has led to simplified GNN models that forgo the learning of aggregation functions, instead opting to preprocess the graph with feature smoothing and later applying a standard machine learning classifier. This insight serves as the groundwork for further advancements in handling large-scale graph data, especially in fields that grapple with datasets that are not just large but also heterogeneous.

Innovations in Handling Heterogeneous Graphs

To extend the benefits of simplified GNNs like the Scalable Inception Graph Network (SIGN) to heterogeneous graphs (which contain diverse relationships and node types), the Neighbor Averaging over Relation Subgraphs (NARS) approach has been proposed. NARS introduces an efficient and scalable method for achieving high accuracy on graph-related tasks. The approach entails preprocessing graphs by averaging features across neighbors within subgraphs that are randomly sampled from the complete set of relationship types.

During the training phase, these averaged features are learned and combined using a one-dimensional convolution operation, which significantly lowers the number of parameters required by the classifier. Moreover, this method effectively addresses challenges unique to heterogeneous graphs and bypasses the limitations of current state-of-the-art heterogeneous GNNs, which are computationally intensive.

Optimizing for Memory Efficiency and Performance

One of the challenges with the NARS approach is the significant memory required to store precomputed features from multiple subgraphs. To mitigate this limitation, an optimization strategy that involves training with a subset of sampled subgraphs has been developed. This optimization can reduce memory requirements without notably impacting the accuracy of the model. This memory-efficient training process is a key contributor to the practicality of the NARS approach in real-world scenarios where resource constraints are a reality.

Conclusion and Future Directions

NARS achieved impressive results, surpassing current state-of-the-art models on several benchmarks for heterogeneous graphs. This confirms that simpler, scalable GNN models are not only viable but sometimes preferable to more complex alternatives. However, future research is needed to extend the simplicity and efficiency of this neighbor-averaging approach to address datasets with a vast array of entity types, each with its own feature space. The continuous evolution of GNNs is anticipated to further unveil methods that can harness the full potential of graph structures for machine learning applications.

Github Logo Streamline Icon: https://streamlinehq.com