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Automated diagnosis of COVID-19 with limited posteroanterior chest X-ray images using fine-tuned deep neural networks (2004.11676v5)

Published 23 Apr 2020 in eess.IV, cs.CV, and cs.LG

Abstract: The novel coronavirus 2019 (COVID-19) is a respiratory syndrome that resembles pneumonia. The current diagnostic procedure of COVID-19 follows reverse-transcriptase polymerase chain reaction (RT-PCR) based approach which however is less sensitive to identify the virus at the initial stage. Hence, a more robust and alternate diagnosis technique is desirable. Recently, with the release of publicly available datasets of corona positive patients comprising of computed tomography (CT) and chest X-ray (CXR) imaging; scientists, researchers and healthcare experts are contributing for faster and automated diagnosis of COVID-19 by identifying pulmonary infections using deep learning approaches to achieve better cure and treatment. These datasets have limited samples concerned with the positive COVID-19 cases, which raise the challenge for unbiased learning. Following from this context, this article presents the random oversampling and weighted class loss function approach for unbiased fine-tuned learning (transfer learning) in various state-of-the-art deep learning approaches such as baseline ResNet, Inception-v3, Inception ResNet-v2, DenseNet169, and NASNetLarge to perform binary classification (as normal and COVID-19 cases) and also multi-class classification (as COVID-19, pneumonia, and normal case) of posteroanterior CXR images. Accuracy, precision, recall, loss, and area under the curve (AUC) are utilized to evaluate the performance of the models. Considering the experimental results, the performance of each model is scenario dependent; however, NASNetLarge displayed better scores in contrast to other architectures, which is further compared with other recently proposed approaches. This article also added the visual explanation to illustrate the basis of model classification and perception of COVID-19 in CXR images.

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Authors (2)
  1. Narinder Singh Punn (19 papers)
  2. Sonali Agarwal (38 papers)
Citations (185)

Summary

Automated Diagnosis of COVID-19 Using Deep Neural Networks on Chest X-ray Images

The paper titled "Automated diagnosis of COVID-19 with limited posteroanterior chest X-ray images using fine-tuned deep neural networks," by Narinder Singh Punn and Sonali Agarwal, investigates an alternative method for COVID-19 diagnosis by leveraging deep learning techniques. The motivation stems from the limitations of RT-PCR testing, particularly its reduced sensitivity at early stages of COVID-19. The research aims to provide a robust, automated technique to support efficient diagnosis using publicly available chest X-ray (CXR) datasets.

Methodology

The authors utilize transfer learning approaches on various deep learning architectures, including ResNet, Inception-v3, Inception ResNet-v2, DenseNet169, and NASNetLarge, for both binary and multi-class classification of COVID-19, pneumonia, and normal cases using posteroanterior CXR images. The training process overcomes the challenge of dataset imbalance through random oversampling and a weighted class loss function, ensuring unbiased learning.

Models were trained on a fused dataset composed of several publicly available CXR datasets: COVID-19 CXR images, RSNA pneumonia detection challenge images, and NLM Montgomery County images. This dataset fusion results in a balanced and comprehensive training resource, allowing for binary classification (COVID-19 vs. non-COVID-19) and more granular multi-class classification.

Results

The models' performance was evaluated using accuracy, precision, recall, loss, and area under the curve (AUC). NASNetLarge prominently displayed better performance across different scenarios, particularly in binary classification tasks. For instance, it achieved an accuracy of 97% and an AUC of 0.99 in COVID-19 identification tasks when utilizing random oversampling to address class imbalance.

Discussion

The implications of this research are significant. By utilizing deep learning techniques for automated COVID-19 detection, there is potential to alleviate the burden on medical testing facilities and provide rapid, accessible screening. This approach may complement traditional diagnostic methods, especially in resource-constrained settings where RT-PCR tests are scarce or infeasible.

Moving forward, the methodology can be extended by incorporating more advanced deep learning architectures and leveraging larger, more diverse datasets. Furthermore, the integration of multi-modal imaging data and the development of explainable AI methods could enhance the interpretability and reliability of the diagnostic models.

In summary, this research highlights the potential effectiveness of applying state-of-the-art deep learning models to COVID-19 diagnosis, demonstrating high performance in classification accuracy and offering a compelling case for the inclusion of AI tools in medical diagnostics. This paper lays groundwork for future exploration and development of AI-driven diagnostic systems that could transform healthcare delivery in the context of pandemic response.

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