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Predicting Cognitive Decline with Deep Learning of Brain Metabolism and Amyloid Imaging (1704.06033v1)

Published 20 Apr 2017 in cs.CV, cs.AI, and stat.ML

Abstract: For effective treatment of Alzheimer disease (AD), it is important to identify subjects who are most likely to exhibit rapid cognitive decline. Herein, we developed a novel framework based on a deep convolutional neural network which can predict future cognitive decline in mild cognitive impairment (MCI) patients using flurodeoxyglucose and florbetapir positron emission tomography (PET). The architecture of the network only relies on baseline PET studies of AD and normal subjects as the training dataset. Feature extraction and complicated image preprocessing including nonlinear warping are unnecessary for our approach. Accuracy of prediction (84.2%) for conversion to AD in MCI patients outperformed conventional feature-based quantification approaches. ROC analyses revealed that performance of CNN-based approach was significantly higher than that of the conventional quantification methods (p < 0.05). Output scores of the network were strongly correlated with the longitudinal change in cognitive measurements. These results show the feasibility of deep learning as a tool for predicting disease outcome using brain images.

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Authors (2)
  1. Hongyoon Choi (5 papers)
  2. Kyong Hwan Jin (24 papers)
Citations (193)

Summary

Predicting Cognitive Decline Using Deep Learning Techniques on PET Imaging

The paper by Choi et al. addresses a significant issue within the context of Alzheimer's disease (AD) prognosis, particularly focusing on mild cognitive impairment (MCI) patients. The paper introduces an innovative application of deep convolutional neural networks (CNNs) to predict cognitive decline and potential conversion to Alzheimer's disease using positron emission tomography (PET) imaging data, specifically 18F-fluorodeoxyglucose (FDG) and 18F-florbetapir (AV-45) scans.

Methodology and Data

The research leverages data from the Alzheimer's Disease Neuroimaging Initiative (ADNI), comprising PET images from 139 AD patients, 171 MCI participants, and 182 normal controls. The deep CNN architecture includes three convolutional layers with corresponding ReLU activations, followed by a fully connected layer. The paper emphasizes minimizing preprocessing steps such as spatial normalization and feature extraction, which are commonplace in earlier studies. By using raw PET imaging data, the CNN was trained initially with samples from AD and normal control cohorts to discriminate between pathological states, with subsequent fine-tuning to predict conversion from MCI to AD.

Results

The CNN-based model showcased an impressive accuracy rate of 84.2% in predicting MCI converters to AD, markedly surpassing traditional feature-based quantification approaches. ROC analysis further confirmed the statistical significance of this model (p < 0.05). The ConvScore, a metric derived from the CNN's output, demonstrated substantial correlation with longitudinal cognitive changes in patients, such as those measured by CDR-SB, ADAS-Cog, FAQ, and MMSE. Notably, ConvScore's AUC was significantly higher than those obtained from feature-VOI approaches, validating its efficacy as a predictive biomarker.

Implications and Future Research

This paper underscores the potential of deep learning methods in medical imaging, particularly in developing predictive biomarkers for neurodegenerative diseases. By accurately predicting which MCI patients are likely to progress to AD, this approach can have significant implications for clinical decision-making and tailoring early intervention strategies. The paper also opens avenues for future research focusing on refining neural networks to improve accuracy further and integrating larger and more diverse datasets to enhance generalization capability.

In clinical practice, the model could support the early identification of patients who might benefit from proactive therapeutic modalities, potentially altering the trajectory of cognitive decline. As a speculative next step, incorporating additional multimodal imaging and omics data into these machine learning frameworks might yield even more robust predictive power and biological insights.

Conclusion

The investigation by Choi et al. successfully articulates the feasibility and advantages of using a deep CNN model to predict cognitive decline and AD conversion in MCI patients using PET imaging data. This model, by efficiently harnessing the data, bypasses conventional preprocessing constraints, thus promising a streamlined, effective avenue for biomarker development in Alzheimer's research. Further studies could enhance these findings, fostering advancements in both the theoretical understanding and practical management of Alzheimer's disease.