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PMLB: A Large Benchmark Suite for Machine Learning Evaluation and Comparison (1703.00512v1)

Published 1 Mar 2017 in cs.LG and cs.AI

Abstract: The selection, development, or comparison of machine learning methods in data mining can be a difficult task based on the target problem and goals of a particular study. Numerous publicly available real-world and simulated benchmark datasets have emerged from different sources, but their organization and adoption as standards have been inconsistent. As such, selecting and curating specific benchmarks remains an unnecessary burden on machine learning practitioners and data scientists. The present study introduces an accessible, curated, and developing public benchmark resource to facilitate identification of the strengths and weaknesses of different machine learning methodologies. We compare meta-features among the current set of benchmark datasets in this resource to characterize the diversity of available data. Finally, we apply a number of established machine learning methods to the entire benchmark suite and analyze how datasets and algorithms cluster in terms of performance. This work is an important first step towards understanding the limitations of popular benchmarking suites and developing a resource that connects existing benchmarking standards to more diverse and efficient standards in the future.

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Authors (5)
  1. Randal S. Olson (19 papers)
  2. William La Cava (18 papers)
  3. Patryk Orzechowski (15 papers)
  4. Ryan J. Urbanowicz (15 papers)
  5. Jason H. Moore (56 papers)
Citations (354)

Summary

Overview of the Paper: PMLB: A Large Benchmark Suite for Machine Learning Evaluation and Comparison

The paper introduces the Penn Machine Learning Benchmark (PMLB), an extensive collection of datasets designed to simplify the benchmarking process for ML practitioners. As the landscape of ML methodologies expands, so does the necessity to comprehensively evaluate these methods against diverse and standardized datasets. Yet, the curation and application of such benchmarks have often been inconsistent, adding unnecessary burdens on researchers. This paper addresses these challenges by presenting a publicly accessible, curated suite of datasets specifically aimed at the evaluation of supervised classification methods in ML.

Data Curation and Representation

The PMLB suite consists of 165 datasets, encompassing a mix of real-world, simulated, and toy data. Standardization efforts within PMLB are notable; every dataset follows a uniform row-column format with numerical encoding of categorical data, ensuring ease of use. Moreover, datasets with missing values were deliberately excluded to prevent confounding results due to varied imputation strategies across different ML methods. The provision of a Python interface to fetch data from PMLB further alleviates common challenges associated with accessing and preprocessing datasets.

Dataset Analysis and Meta-Features

Within the suite, datasets are characterized by several meta-features, such as the number of instances and features, the nature of features (binary, categorical, continuous), endpoint type, and class imbalance. Noteworthy is the clustering analysis based on these meta-features, which reveals inherent challenges posed by these datasets, such as binary versus multiclass classification and varying levels of class imbalance. This analysis also underscores the diversity among the datasets and aligns with the ultimate aims of PMLB: to act as a comprehensive benchmarking resource spanning a wide range of problem types.

Methodological Evaluation

In a detailed evaluation, 13 supervised ML classification methods, both well-established and diverse, are applied across the datasets. Employing balanced accuracy as the scoring metric, reflecting considerations of class imbalance, the paper conducts extensive parameter tuning through grid search with cross-validation. Subsequent biclustering of ML performance against datasets elucidates relationships between method effectiveness and dataset characteristics. The results can aid researchers in understanding which dataset types reveal method strengths or weaknesses, providing a robust baseline for future method evaluations.

Findings and implications

The analysis demonstrates that while many datasets are easily solvable by a variety of ML methods, others clearly differentiate the capabilities of different ML models. Such differentiation is critical for advancing ML methodologies, facilitating informed methodological adaptations or selections tailored to specific data characteristics.

Future Directions

Despite its achievements, PMLB is a continually evolving project. Future expansions are set to incorporate datasets with missing values, regression tasks, and enhanced representation of imbalanced datasets. Such advancements will further enrich the benchmarking landscape, allowing PMLB to better serve as a comprehensive tool for assessing the performance of ML methodologies regardless of the peculiarities of different data types. The paper anticipates these developments to promote more informed and transparent evaluations among researchers, fostering the advancement of ML methods.

In conclusion, the PMLB suite marks an important stride in ML benchmarking, offering a standardized, diverse, and open-access repository for evaluation purposes. It holds significant potential to guide future efforts in dataset curation and methodological development within the machine learning community.