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Deterministic sub-linear space LCE data structures with efficient construction (1601.07670v2)

Published 28 Jan 2016 in cs.DS

Abstract: Given a string $S$ of $n$ symbols, a longest common extension query $\mathsf{LCE}(i,j)$ asks for the length of the longest common prefix of the $i$th and $j$th suffixes of $S$. LCE queries have several important applications in string processing, perhaps most notably to suffix sorting. Recently, Bille et al. (J. Discrete Algorithms 25:42-50, 2014, Proc. CPM 2015: 65-76) described several data structures for answering LCE queries that offers a space-time trade-off between data structure size and query time. In particular, for a parameter $1 \leq \tau \leq n$, their best deterministic solution is a data structure of size $O(n/\tau)$ which allows LCE queries to be answered in $O(\tau)$ time. However, the construction time for all deterministic versions of their data structure is quadratic in $n$. In this paper, we propose a deterministic solution that achieves a similar space-time trade-off of $O(\tau\min{\log\tau,\log\frac{n}{\tau}})$ query time using $O(n/\tau)$ space, but significantly improve the construction time to $O(n\tau)$.

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Authors (6)
  1. Yuka Tanimura (2 papers)
  2. Tomohiro I (37 papers)
  3. Hideo Bannai (78 papers)
  4. Shunsuke Inenaga (102 papers)
  5. Simon J. Puglisi (45 papers)
  6. Masayuki Takeda (49 papers)
Citations (17)

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